| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51161 |
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| Symbol | SRP40 |
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| ID | 4851072 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 873822 |
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| End bp | 875762 |
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| Gene Length | 1941 bp |
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| Protein Length | 620 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640392780 |
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| Product | jun-like transcription factor |
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| Protein accession | XP_001387398 |
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| Protein GI | 126274058 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.457199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.881138 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACTA GAGGTCCAAG TATAGCTCCT AAGCTGGAGC CTTCACCCAT AGCTCTAGCA
GGATCTCCTC CATCAAGTGG GCCTTCTCCC AGACCTATTA CTTCTCTTTC TGTAGCCAGT
CCTTCTGGGG ACCTTGGAAT GACCACTATT ATGACGTCCA AGGAATGGGT ATTACCTCCG
AGACCAAAGC CGGGCAGAAA ACCCAGTGTA GATACCCCTG CTTCAAAGAG AAAGGCTCAG
AACCGAGCTG CCCAACGCGC TTTCCGTGAA AGAAGAGCTA CCAGGGTTCA AGAATTAGAA
CAGAAACTCA TGGAGATGGA GAAAGAGAAA GAAGTTAAGG AAATGGCGCT TGTGAATACT
ATCAACAAGT TAAAGGTAGA AAACCAATTC TTGATCAAAA GCATAGAACA GTTGCGTACA
GATATGTCCA GTATTCGTAA TTCCCAGACG CAGACGACGT TGAAAATGTC CCAAATGGCT
CAACCAGCTT CTTCTTCGAA GTCTTCGTTA GGTATTGGAG AGTCATCTAT AAGCAATTCT
CCTATAAATC ACAATACCGG TTCTCCGGCT AGCTCCGCTT ACTCCGTTCA GCAGATTTCG
CCAGCTCCTT CAACCGACTC TCCTCCATCC TATGCTAACA GTCATAACTA TCACAACCAT
AACCATAACC ATCAACATCA ACATCATAAT AGTGTCAAAG GTAGTTCCAA TTTGACTCCT
CGTACGTCGT CTGATACAAC TCCTGATCAT GGCAAGAGTC TGCAGCAAAA TAGAGACTCC
AGTAGTTTTG ATTGCGGAGT TTGTCTCGAG GATGAATGTC TCTGTGAATC TGTAGGGTTG
AAAGATCCAG CTCCTAAGAA AGCAGAGGAT TTAGCCAGAG AACTAGAAGA AACTGTCAAT
TCGTTTAAGC CTGTACCTGC AGTTTCTTTG TCTAGAAATA AGAGAAAGGT TGTAGATACC
GAAGCTCAGG AGATTGACTT CACGGAACAG TTCTCAACCA AGACTAAACT TATGCCTGAC
TTGAAGAAAC TCAAGAAGGC TTCGAGCACA TCCATGAAGA CAAGTTCTCA GTTGGGTGAC
AGTGCTGAGT TCAACGAAGA CTCACCCATG GAGAATTGTG GTTTCTGCTC GTTTGATACT
CCATGTGTCT GTCGTGAAGC AGCTAAGGAG GCCGCATTGT TATCAGATAC TTTAAACCAA
CAGACGATAG AAGAAGGTGA TGAGGTGGAC GACGAGATGT CAAACGAACA CAAAACGTTG
CCTCCGCTTC AGATGAACTC CAACAAGATG TTCCGTAAAC TGTCGTTGCC AGTGATGCAT
CCAGGTCCCT CTGTGGAATT CAGGGAAATC ACCAATATTA CTCCAGGAGT GGTTCCTACT
GTAGTTACTT CAACTTCCAG AAGACTTAAT CCTGAGTCTT CTACATCAAC TTCTTCTTCG
TTATCGACGC TCAACTCTGG CAATGATGCT TCTAAAGATA ACTCAGAATG TACTGGTAAT
CCTGGTACTT GTAGGCAATG TCAAATGGAT CCTATGTCGA CATTGTTCTG TACTACTGTA
GCCAACAAGG AGAAGAATGA GCCAGGCTCT AGATCCCGGT CTTCCTCTAC AGCATCGCCT
CAACCACAGA TGATATCCAG GTCTGGCTCT AGGACCAGCT TGCCTTCTAT GGCCGCCCCT
ATTACCAATC CTTCTACTCC TGTTTCCACT GGCTCTGGCG TTCCAGCTTC GGGTCCAGCT
ACCCCTGGAG GTCCTGGTTC TACGAACAAT GGTATGTTCA TACCGTGTGC GGATGCCTAC
AAGACGTTGT CACGTCACAA GAAGTTCAAT TCGGTAGATT TCAGCACATT GGTAGGGAAA
TTGACTACTC GAGGAATGCA AGTTGAAGTG CAATCTGTGG CTAACGTGTT GAGGGAATTG
GATAGAAGGT TATACAATTA G
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| Protein sequence | MSTRGPSIAP KLEPSPIALA GSPPSSGPSP RPITSLSVAS PSGDLGMTTI MTSKEWVLPP
RPKPGRKPSV DTPASKRKAQ NRAAQRAFRE RRATRVQELE QKLMEMEKEK EVKEMALVNT
INKLKVENQF LIKSIEQLRT DMSSIRNSQT QTTLKMSQMA QPASSSKSSL GIGESSISNS
PINHNTGSPA SSAYSVQQIS PAPSTDSPPS YANSSSNLTP RTSSDTTPDH GKSLQQNRDS
SSFDCGVCLE DECLCESVGL KDPAPKKAED LARELEETVN SFKPVPAVSL SRNKRKVVDT
EAQEIDFTEQ FSTKTKLMPD LKKLKKASST SMKTSSQLGD SAEFNEDSPM ENCGFCSFDT
PCVCREAAKE AALLSDTLNQ QTIEEGDEVD DEMSNEHKTL PPLQMNSNKM FRKLSLPVMH
PGPSVEFREI TNITPGVVPT VVTSTSRRLN PESSTSTSSS LSTLNSGNDA SKDNSECTGN
PGTCRQCQMD PMSTLFCTTV ANKEKNEPGS RSRSSSTASP QPQMISRSGS RTSLPSMAAP
ITNPSTPVST GSGVPASGPG STNNGMFIPC ADAYKTLSRH KKFNSVDFST LVGKLTTRGM
QVEVQSVANV LRELDRRLYN
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