| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51039 |
|---|
| Symbol | AAT22 |
|---|
| ID | 4851336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 1533117 |
|---|
| End bp | 1534328 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 640393044 |
|---|
| Product | Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 |
|---|
| Protein accession | XP_001387526 |
|---|
| Protein GI | 126274377 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTA CTTCCAAGTT CAACCAGTTG GTCAGAGAAG AGCCTGATCC CATTGTGAAG
ACTATGTCCC TTTACGCCCA AGACCCTTCT CCTAATAAAG TAGATGTTTC TATCGGAGTC
TACAAGTCGG AATCCGGAGG ACCTTACCTC TTCCCTTGTG TCGCGGAAGC AAAGAAGATC
TTGGCTGCTA ACGACCCTGG TCACAACTAT ACCAACATGC AAGGTATTCC TGAGTTCTTG
GAAGGTGCTA GAAGGGCTGC TTTTGGTGAA AAGTACGCCA GCGAAGGCAA GTTGGCTTCG
TTGCAAACTA TCTCTGGTAC TGGTGCTCTC CACATGGCAT TCCTCTTCTT GAGAGAAGCT
GGCTACACCA ACTATTACTT GGGAGTACCC TCTTGGTCCA ACTACGTTTC CATGGTTGAA
CACGTAGGTG GTAAGGTCAC CACCTTCAAT CACTACAGAG AGGATACCAA GGACGTAGAC
TTTGACTCGG TTGTCGCTAC CTTGGAATCG GCTCCTGCTG ACTCTGTTTT CATTTTCCAG
ACCTGTTGTC ACAACCCCAC TGGTGCTGAC TACACCCAGG AACAATGGAC GAAGATCGCT
GAGTTGGTCA AACAAAGAAG CATTATCCCA TTGCTCGATA CCGCGTACCA AGGCTTCTCC
TCCGGTGACA AGGAAAAGGA TGCTTGGGCT ATCAGACACT TTTACGAATT GGGTATTGAG
TTCGTTGTTT CTCAGTCGTT CTCCAAGAAC TTGGGCTTAT ATGGAGAAAG AGTGGGAGCT
ATGCATGCTG TTGTTCAAGA CAAGGAGTTT GTGCCCAACG CTCAAAGCAC CTTGGTAGCT
CTCTTCAGAT CCGAATGCTC GTTTGCTCCA GCTTTTGGAG CCAGGGTTGC TTCTATCGTC
TTCCAATCCC CAGAATTGCA AAAGGTCTGG AGAGAAGACG TCGCCAACAT CACTAAGAGA
TTGAAGTCTG TCAGACAGAA GGTGTTAGAA AGATTGACAA AGTTGCAAAC CCCAGGCACA
TGGGACAACG TTATCAAGCA AGAAGGTTTG TTCTGGTACT CAGGCTTAAC TCCAGCCCAG
AATGATAGAC TTATCTCGAA GCATAGCGTC TACTCCACTT CAATCGGAAG AGTCAACATT
GCTGGTTTGT CCGATGCCAA TATCAACTAC TTCTGTGATG CCGTGGATGA AGTCGTCAGA
GCCATCAACT AA
|
|---|
| Protein sequence | MTVTSKFNQL VREEPDPIVK TMSLYAQDPS PNKVDVSIGV YKSESGGPYL FPCVAEAKKI
LAANDPGHNY TNMQGIPEFL EGARRAAFGE KYASEGKLAS LQTISGTGAL HMAFLFLREA
GYTNYYLGVP SWSNYVSMVE HVGGKVTTFN HYREDTKDVD FDSVVATLES APADSVFIFQ
TCCHNPTGAD YTQEQWTKIA ELVKQRSIIP LLDTAYQGFS SGDKEKDAWA IRHFYELGIE
FVVSQSFSKN LGLYGERVGA MHAVVQDKEF VPNAQSTLVA LFRSECSFAP AFGARVASIV
FQSPELQKVW REDVANITKR LKSVRQKVLE RLTKLQTPGT WDNVIKQEGL FWYSGLTPAQ
NDRLISKHSV YSTSIGRVNI AGLSDANINY FCDAVDEVVR AIN
|
|---|
| |