Gene PICST_50590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50590 
Symbol 
ID4840902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp642614 
End bp643408 
Gene Length795 bp 
Protein Length264 aa 
Translation table12 
GC content43% 
IMG OID640392217 
Productpredicted protein 
Protein accessionXP_001386716 
Protein GI150866946 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.495223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG ACGAACTTAG CTTGGAAGGT GGCTTATTCG AAGAGCCGGA AGGGTTCCTT 
CCACCACCTC CAGAATCCCA TTTTGCATAT TACGAACGTA AGCTTGCCAA TGTCACTCCT
CTGAAGGTCG ATTTGAAGTT GGTTGGAAAG TCTCCATTAT GGGGACATTT GTTGTGGAAT
GCCGGAGCCT ACACGGCCGA CTTCTTGGAT AAACATGCTT TAGAGTATGT CAAAAACAAA
AAGGTGTTGG AATTGGGAGC TGCGTCCGGT TTACCTGGGA TTATCTGTGC CCTTAATGGA
GTTGAAAAGA TAGTGTCAAC AGACTATCCA GATGCCGACT TGATTTCACA TATTCAGTAT
AATTTTGATG CTTTAGAGAA GACTGGTGCA TATCCAAAGA CCTGCTACGA CGTAAAAGGT
TACATTTGGG GACATGATGT GACCCCTTTG GTCTACGGCG AAGAAACAGA AACTAAAAGA
GAAATCGCTG AACTGGACAA GTTCGATCTC ATCATCTTAG CGGACTTGGT GTTCAACCAT
ACCGAGCACC ACAAGTTGTT GGAAACATGT AGAAATAGTT TGAAGACAAA CGGAAAATGT
TTGGTTGTGT TTTCGCCTCA TAGAGCTCAT CTTTTGCAAG ATGACTTACA GTTTTTTGAA
ACTTGTGAGA ACTACGACTT CAAATCAGAA AGAATAGAGT TGGTCAACTG GAAGCCAATG
TTCGAAGAAG ATGAAGAGAC AGCCGAGATT AGATCAAGAG TCTACTCTTA CTGGTTGAAT
CCGCAATGGA AATAA
 
Protein sequence
MSDDELSLEG GLFEEPEGFL PPPPESHFAY YERKLANVTP SKVDLKLVGK SPLWGHLLWN 
AGAYTADFLD KHALEYVKNK KVLELGAASG LPGIICALNG VEKIVSTDYP DADLISHIQY
NFDALEKTGA YPKTCYDVKG YIWGHDVTPL VYGEETETKR EIAESDKFDL IILADLVFNH
TEHHKLLETC RNSLKTNGKC LVVFSPHRAH LLQDDLQFFE TCENYDFKSE RIELVNWKPM
FEEDEETAEI RSRVYSYWLN PQWK