Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_50268 |
Symbol | |
ID | 4841163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 644242 |
End bp | 645396 |
Gene Length | 1155 bp |
Protein Length | 385 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640392478 |
Product | predicted protein |
Protein accession | XP_001386528 |
Protein GI | 150866806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.891923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.335478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACAA TAATAAACCA GGAATGGTCG AGGATCTCGA CAGAATTGGT CCAGAACCCA GATGATTTGA ATCTTTGGCA ACTGCTAATC AAGGCAGCCG AGTCTAATAC TAAACGAGGC ATAACCAAGT CATCTGGCTT CGAAGAAATC GATGTGCTAA GAGTCTCGTA CCAAAAGTTG CTCCAAAAGT ATCCCTTATT GTATAACTAC TGGATAAAGT TCGCCGAGTG GGAATTTCAC CTTGGAGATA CTGATAGAGC CAACCAAGTG TATCAGTCCA GTTTAAAACA TCTTTCCTAC AGCTGCGAGA TTTGGACCAG CTACTTGAAT TTCAAGATCA ACACCTCTAA CGGTAACTTG GACGAAGTCT TGGGGTTGTT TGAACTGGCC AGAAGAAAAA TCGGCTACCA TTTCCATGCA TACGAGTTCT ACAAGTTGTA CCTTTCATTC CTTGAGAACT ACCAAACTGA AACAGAGAAC TTCAAGTTGA AGTACTATGT TTTGCTTAGA ATCATAGTGG AAATACCGTT ATACCACTAC GAGTACTTCT ACAAGAAATT GTTTGATACT TTTGCAGAGA TTGGCAACGA CGAAAAAAGA GCTAACGAAC TTGTGCCGTT GGTGGTGCCG GAGAAGGAAT TGAAAAATTA CAAAACATCC GAAAACAAGC AGTTAGCATT ACATTTGAAA AAGACATTTG TTGATGCCTA TTTAACCACA CAATTCAAAG TATATGAATT GTTCAACTTT GAAAAACATA TCACTAGGCA GTACTACGAC ACAAGCAGCA TTTCCTCCCA GCAACTAGAG AATTGGGACA TGTACCTTGA CTTTCTTGAG TTGAGAGAAT ATCCCAATGA TTATATCATC TTCACATACG AAAGATGTTT GATCCCGACA GCTTCGTATG CCAGATTCTG GACTAAATAC AGCGACTACT ACATCAACCA AGGAAACCAC TTGAAAGCTG CTGAAGTCCT CGTCAGAGGA TACAATTATA GTGGACAGCA TAGCTTATTA TTGAAACTTG TCGATTTGCA AATATATCTT CACAATTTCA CCAAGGCTAG AGACATGATA CTTGCATTTA TCAAGACGAA CGCATCAGTT CCACTTCCTA TCTACGAGAA GTTGATTAAC ATAGAACGGT TCTTA
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Protein sequence | MDTIINQEWS RISTELVQNP DDLNLWQSLI KAAESNTKRG ITKSSGFEEI DVLRVSYQKL LQKYPLLYNY WIKFAEWEFH LGDTDRANQV YQSSLKHLSY SCEIWTSYLN FKINTSNGNL DEVLGLFESA RRKIGYHFHA YEFYKLYLSF LENYQTETEN FKLKYYVLLR IIVEIPLYHY EYFYKKLFDT FAEIGNDEKR ANELVPLVVP EKELKNYKTS ENKQLALHLK KTFVDAYLTT QFKVYELFNF EKHITRQYYD TSSISSQQLE NWDMYLDFLE LREYPNDYII FTYERCLIPT ASYARFWTKY SDYYINQGNH LKAAEVLVRG YNYSGQHSLL LKLVDLQIYL HNFTKARDMI LAFIKTNASV PLPIYEKLIN IERFL
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