Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_50059 |
Symbol | HYR2.1 |
ID | 4840580 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 26684 |
End bp | 30589 |
Gene Length | 3906 bp |
Protein Length | 473 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391895 |
Product | hyphally regulated cell wall protein |
Protein accession | XP_001386218 |
Protein GI | 150866574 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTACTTT CAAGTCTTCT AGCAAGAATA CTTGTTCTTG TTTCTGTTGT CTATGCTACT AGAGATGTTG TTATTACTGG ATCAAAAGTC GATAAGGGCC CCATTAATTT GTCCATTGGT GATATAACCA TCGAAGAAAA TTCTTATTGG TCTATCTTTG ATAACTCTGT GTCTGCTTTG AAGGGTTCAC TCTGGGTAAA AAAGGGCGCC GGTTTCTATA TTACAGGTAC AGACAGGTTA ATAAACTTAT CCGTTACACT TGCATTTGGT CAAAATTCCA TAAAGAACGA AGGTACTGTT GTGTTCAACT CCATCTTCTG CAAACTTGCA ACCAAATATG AGCTTATTGG TTCTTCTTTC TATAACTCAG GTGAAATGTT CTTGGCCACC AATGGAGCAC TTGGAAGTTT AACTGCAATC ACGTCGAGTT CTTGGACAAA CTCAGGTTTG TTGGTCTTTT ACCAAAACTC AAGAACTAGT GCAATTGTTT CGCTTGGTAA ACCACTAGGA ACGATTCGTA ACGATGGTCA AATCTGTTTG CATAACGAAT TGTTCAAGCA AGAAACGAAC ATTGTTGGTA GTGGTTGTAT CACTGCTGAT AAGAATTCTT CTATTTTCTT ATCGAATTGT TTATTGGAGA TCGATCCAAA GCAATCATTC TACCTTGCTG ATTCCCAATC CTCCATTAGA GCAAAAGCAA TTTCTAAGTC AAAGACCTAT ACCGTGTATG GGTTTGGTAA TGGAAACAAG ATTGGTTTGG ATCTTCCTCT TATTTCGCTT CCAATTCTTG GTAGTTGGGG TTATGATGAG AAGAGAGGTA TTTTGACTCT TAGAGCACTT GGAAACCTTG CACACAATTT CATAATCGGT ACTGGATACG ATAAAAAGAA GTTTCAAATT ACTACTGATT CCAGTCTTGG TTTGTTGAGT GTATTTAACG GCGCTTTGAA ATATAATGGC CCAGTTCCAA ACCTGAGTAT CCCATCTGCA TGTAGACCAT GCAAGCCAGT ACCTTCTGTT CCAGATGGTC CTCATACAAC ATCCCAGACT ACTGCCAAGA CACCATGTAC AACATCGACA AAGAAGCACT CTACCAGATC TTCTAAATCG TGTAATAGTC AGATCACAGT TACAAGCACA TGGACTGAAA TCACCACAAC TACAGTTACT ATCAGTGAAA CTGAAGGAGG TACTGATACT GTCATCATTG TTGTACCTAC TGAATGTACA ACTAGTACTG GAAACGATCA AGCTTCTTCT ACTCCAAACC CTCAAACTAC TGTTACCACT ACATGGACCG GTTCTTACAC CACTACCATC ACCGAGACTG ATACTCAGGG TGGCACTGAT ACTGTCATTG TGGAAGTTCC AACATCTGGA AACGATCAGG CTTCTTCTAC TCCAAACCCT CAAACTACCG TTACCACTAC ATGGACCGGT TCTTACACCA CTACCATCAC CGAGACTGAT TCTCAGGGTG GAACTGATAC TGTCATTGTA GAGGTTCCAT CTACTCCAAA CCCTCAAACC ACCGTTACCA CTACATGGAC CGGTTCTTAC ACCACTACCA TCACCGAGAC TGATACTCAG GGTGGCACTG ATACTGTCAT TGTGGAAGTT CCAACATCTG GAAACGATCA GGCTTCTTCT ACTCCAAACC CTCAAACTAC CGTTACCACT ACATGGACCG GTTCTTACAC CACTACCATC ACCGAGACTG ATTCTCAGGG TGGCACTGAT ACTGTCATTG TGGAAGTTCC AACATCTGGA AACGATCAGG CTTCTTCTAC TCCAAACCCT CAAACTACCG TTACCACTAC ATGGACCGGT TCTTACACCA CTACCATCAC CGAGACTGAT TCTCAGGGTG GAACTGATAC TGTCATTGTA GAGGTTCCAT CTACTCCAAA CCCTCAAACC ACCGTTACCA CTACATGGAC CGGTTCTTAC ACCACTACCA TCACCGAGAC TGATACTCAG GGTGGCACTG ATACTGTCAT TGTGGAAGTT CCGTGCACTG AGAAAACTCA AGTTACAGTA ACTACCACAT GGACAGGCTA CACAACTAAA ACAGTTACTG TAAGTGAAAC TGAGGGATCT ACCGAAACAG TCATTATTGT GATCCCTTGT TCCAGTTCTG ATGAATCCGC AACTGAAAGT AACTCTTCGG TCCCTTCAGA CTCCACTTCT GTTGAATTCA CTTCTGAAAT CTCCTCTACT GAAAGTCCAT CTGGCTCGAA CACTGAAGGT CCATCTACTT CTGAAGGCCC ATCTTCTGAG GGTCCATCTA CTTCTGAAGG TCCATCAGGT TCAAACACTG AAGGTCCATC TACTTCTGAG GGCCCATCTT CTGAAGGTCC ATCTACTTCT GAAGGTCCAT CAGGTTCAAA CACTGAAGGT CCATCTACTT CTGAAGGCCC ATCTTCTGAA GGCCCATCTT CTGAGGGTCC ATCTTCTGAG GGTCCATCTA CTTCTGAAGG TCCATCTGGT TCAAACACTG AAGGCCCATC TACTTCTGAG GGTCCATCTG GCTCGAACAC TGAAGGCCCA TCTACTTCTG AGGGCCCATC TTCTGAAGGT CCATCTACTT CTGAAGGTCC ATCAGGTTCA AACACTGAAG GTCCATCTAC TTCTGAAGGC CCATCTTCTG AAGGCCCATC TTCTGAGGGT CCATCTTCTG AGGGTCCATC TTCTGAGGGT CCATCAGGTT CAAACACTGA AGGCCCATCT TCTGAGGGTC CATCTGGCTC GAACACTGAA GGTCCATCTA CTTCTGAAGG TCCATCTGGC TCGAACACTG AAGGTCCATC TACTTCTGAA GGTCCATCTG GCTCGAACAC TGAAGGTCCA TCTACTTCTG AAGGTCCATC AGGTTCAAAC ACTGAAGGTC CATCTACTTC TGAGGGCCCA TCTTCTGAAG GTCCATCTAC TTCTGAAGGT CCATCAGGTT CAAACACTGA AGGTCCATCT ACTTCTGAAG GCCCATCTTC TGAAGGCCCA TCTTCTGAGG GTCCATCTTC TGAGGGTCCA TCTTCTGAGG GTCCATCTTC TGAGGGTCCA TCTTCTGAGG GTCCATCTAC TTCTGAAGGT CCATCTTCTG AGGGTCCATC TACTTCTGAA GGTCCATCTT CTGAAGGTCC ATCTACTTCT GAAGGTCCAT CAGGTTCAAA CACTAAAGGT CCATCTACTT CTGAAGGCCC ATCTTCTGAA GGCCCATCTT CTGAGGGTCC ATCTTCTGAG GGTCCATCTT CTGAGGGTCC ATCTACTTCT GAAGGTCCAT CTGGCTCGAA CACTGAAGGC CCATCTACTT CTGAAGGCCC ATCTTCTGAG GGTCCATCAA CTTCTGAAGG TCCATCAGGT TCAAACACTG AAGGCCCATC TTCTGAGGGT CCATCTGGCT CGAACACTGA AGGCCCATCT TCTGAGGGTC CATCTGGCTC GAACACTGAA GGTCCATCTA CTTCTGAAGG TCCATCTGGC TCGAACACTG AAGGTCCATC TACTTCTGAA GGTCCATCAG GTTCAAACAC TGAAGGTTCA TCTTCTGAGG GTCCATCTAC TTCTGAAGGC CCATCTTCTG AAGGTCCATC TACTTCTGAG GGCCCATCTT CTGAGGGACC ATCTACTTCT GAAACGCCAT CAGGCTCTGA CACAGAAGTT TCAAGTTCTG TAGAAGCATC GTGTGTTCCA TCTTACATTA CAGTAACAGT CACAACTACT GCAGAGCCAA TTGACACAGT CACCGTTACT AGTTGTCCAA CTATGAAACC ACCACATTCG ACAGATACCA TTTATACAGT GACATCAGTT TATATTACCG AAACAACTAC CACCACAGCA CGTACAACAC TCCCAACTGT TACAGTTACA GAAACGAAGA CTAAAGGGTA CTTTAGGTTC TTCTAG
|
Protein sequence | MLLSSLLARI LVLVSVVYAT RDVVITGSKV DKGPINLSIG DITIEENSYW SIFDNSVSAL KGSLWVKKGA GFYITGTDRL INLSVTLAFG QNSIKNEGTV VFNSIFCKLA TKYELIGSSF YNSGEMFLAT NGALGSLTAI TSSSWTNSGL LVFYQNSRTS AIVSLGKPLG TIRNDGQICL HNELFKQETN IVGSGCITAD KNSSIFLSNC LLEIDPKQSF YLADSQSSIR AKAISKSKTY TVYGFGNGNK IGLDLPLISL PILGSWGYDE KRGILTLRAL GNLAHNFIIG TGYDKKKFQI TTDSSLGLLS VFNGALKYNG PVPNSSIPSA CRPCKPVPSV PDGPHTTSQT TAKTPCTTST KKHSTRSSKS CNSQITVTST WTEITTTTVT IISSSVEASC VPSYITVTVT TTAEPIDTVT VTSCPTMKPP HSTDTIYTVT SVYITETTTT TARTTLPTVT VTETKTKGYF RFF
|
| |