Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_49748 |
Symbol | |
ID | 4840670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 904609 |
End bp | 905211 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391985 |
Product | predicted protein |
Protein accession | XP_001386363 |
Protein GI | 150866689 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.204732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTCACAACAA TACGATGTTT AGCCTTGGGG TCACCGTCAA ATAGTAGAAA TGCATTATAC CAACTAGCGT ATGTGGTGGA AATAGCCAAG TTCTTTGACA TCGACAGAGT CTCCATGTAT GACCCAGTTT TCACATCTAA GGACGTCTAT CTATTGGAGT CAATGAAATA TGTGGTGGAG GAGTCAACTG AGCTGGAGCC AAAGGAGACT CTCTACTTTA TACCGCATGC TCCTTTGGAG CTTACAAATG TCATTCTAAA CAACGAAAAG CCGGCATATA TCTTGGGTAA TGACATCGTA TCCCATACTG ATAGATACAC CAAACAGAAG TTATACGATA CTTATCCCAC GATCTCATAT CTTGTACATT TAACTCAAAA GAGTCGAGAT AAGTCGCATG TAGTAGATGA CAATGAGGAT TTTGTCCCTG TGACCAAACG AAAGAAAAGA GGTAAGAAGG CTTTTCAGGA ACCAACTTTG AACTACGACG GTCAGGAATG GTACTTTATG ACGGCCACAG TATCTCGATT TGTGGAAAGC TTCAGAAAGA ATGATGACTG GGGAAACTCG TTCTCTGACC TAGCCTATCA TGTTCTTGAA TAG
|
Protein sequence | FTTIRCLALG SPSNSRNALY QLAYVVEIAK FFDIDRVSMY DPVFTSKDVY LLESMKYVVE ESTESEPKET LYFIPHAPLE LTNVILNNEK PAYILGNDIV SHTDRYTKQK LYDTYPTISY LVHLTQKSRD KSHVVDDNED FVPVTKRKKR GKKAFQEPTL NYDGQEWYFM TATVSRFVES FRKNDDWGNS FSDLAYHVLE
|
| |