Gene PICST_49748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_49748 
Symbol 
ID4840670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp904609 
End bp905211 
Gene Length603 bp 
Protein Length200 aa 
Translation table12 
GC content41% 
IMG OID640391985 
Productpredicted protein 
Protein accessionXP_001386363 
Protein GI150866689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.204732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCACAACAA TACGATGTTT AGCCTTGGGG TCACCGTCAA ATAGTAGAAA TGCATTATAC 
CAACTAGCGT ATGTGGTGGA AATAGCCAAG TTCTTTGACA TCGACAGAGT CTCCATGTAT
GACCCAGTTT TCACATCTAA GGACGTCTAT CTATTGGAGT CAATGAAATA TGTGGTGGAG
GAGTCAACTG AGCTGGAGCC AAAGGAGACT CTCTACTTTA TACCGCATGC TCCTTTGGAG
CTTACAAATG TCATTCTAAA CAACGAAAAG CCGGCATATA TCTTGGGTAA TGACATCGTA
TCCCATACTG ATAGATACAC CAAACAGAAG TTATACGATA CTTATCCCAC GATCTCATAT
CTTGTACATT TAACTCAAAA GAGTCGAGAT AAGTCGCATG TAGTAGATGA CAATGAGGAT
TTTGTCCCTG TGACCAAACG AAAGAAAAGA GGTAAGAAGG CTTTTCAGGA ACCAACTTTG
AACTACGACG GTCAGGAATG GTACTTTATG ACGGCCACAG TATCTCGATT TGTGGAAAGC
TTCAGAAAGA ATGATGACTG GGGAAACTCG TTCTCTGACC TAGCCTATCA TGTTCTTGAA
TAG
 
Protein sequence
FTTIRCLALG SPSNSRNALY QLAYVVEIAK FFDIDRVSMY DPVFTSKDVY LLESMKYVVE 
ESTESEPKET LYFIPHAPLE LTNVILNNEK PAYILGNDIV SHTDRYTKQK LYDTYPTISY
LVHLTQKSRD KSHVVDDNED FVPVTKRKKR GKKAFQEPTL NYDGQEWYFM TATVSRFVES
FRKNDDWGNS FSDLAYHVLE