| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_49260 |
|---|
| Symbol | MAS2 |
|---|
| ID | 4840693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | + |
|---|
| Start bp | 678396 |
|---|
| End bp | 679886 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640392008 |
|---|
| Product | Mitochondrial processing peptidase alpha subunit, mitochondrial precursor (Alpha-MPP) |
|---|
| Protein accession | XP_001386145 |
|---|
| Protein GI | 126139245 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0300879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.382382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTT CTAGCCTTGC AAGAAGAGCA TTTACTGCTG CCACCAAACC CAACATCGAA
ACTTCCACTC TTTCGAATGG GCTTCGATTA GTTACAGACT CCACACCGGG CCATTTCAGC
GCTCTTGGGG CCTATGTAGA TGCTGGATCG AGATTTGAAA ACCCTAATAA GCCCGGCTTG
TCTCATATAT GTGACCGTTT GGCATGGAAG TCTACTGAAA AGTACTCAGG CATGGAGCTC
ATAGAGAACC TTGCCAAGTT GGGTGGAAAC TACATGTGTT CCGCACAAAG AGAATCTGTC
ATCTACCAGG CTTCTGTTTT CAACAAAGAT GTAGAAAAGA TGTTTGATTG TATTGCCCAA
ACTGTGAGAG CTCCTCGTTT CACTGACCAG GAACTCTTTG AGACTCTTCA AACTGCAGAG
TACGAAGTCA ACGAAGTTTC GCTAAAACAC GATATGTTTC TTCCGGAAGT TTTACATTCG
GCTGCATACC AAAACAATAC CTTGGGATTG CCCTTGTTCT GTCCCCCAGA ACGGATCCCA
GAAATCGGCA AATCTGACAT CATCAACTAC CACAACCAGT TCTTCCAGCC ACAGAACATC
GTAGTGGCAA TGGTAGGTGT GCCTCATGAA CATGCTGTCA AGTTAGCTGA AAAACAATTT
GGGGATTGGA AGCCGGCAAA GAGTTATAGG CCCGACTTCG GAACCGTCAA GTACACTGGT
GGTGAAATAT CCTTGCCTTT CCAGCCTCCC ATCTACAGTA ATATGCCTGA ACTATACCAT
ATGCAAATTG CGTTCGAGAC TACCGGTTTA CTCAGTGACG ACTTGTATGC GTTGGCAACT
TTACAGAAGC TACTTGGAGG TGGTTCCTCA TTTTCTGCTG GTGGTCCAGG TAAGGGTATG
TTTTCCAGAT TGTACACCAG AGTATTGAAC CAGTACGCAT ATGTAGAGAA CTGCATGAGT
TTCAACCATT CGTACATTGA TTCTGGTCTC TTTGGTATAA CGATATCGTG TTCTCCAAAT
GCTGGCCATG TGATGTCGCA GATCATCAGT TTTGAGTTGT CAAAATTGCT TGAAAAAGAT
CCTGCCAAGG GCGGACTCAC AGAGAAAGAA GTCAAGAGAG CCAAGAACCA GCTTATCAGC
TCCTTGTTGA TGAATATAGA GAGTAAGCTC GCCAGATTGG AAGACTTGGG CAGACAGATC
CAATGCCAGA ACAAGATCAC CACCATCGAC GAGATGATCC AGAAGATCGA AAGCTTGTCT
CTAGAAGACT TGAGAGTAGT AGCTGAAAAG GTACTTACTG GCAGTGTAAT AACTAAAGGC
ATAAGTAGCG GACAACCTAC TGTAGTAATG CAAGGAGACA GAGCTTCATT TGGTGACGTT
GAGTTCATTC TTCGTCACTA CGGTTTGGGG AAGTTTCAAG GTCCTCCATT GGAAGAACCT
AGAGATTTCT CCAAGATAGA AAAGCCTCAT AGATTTGGTA AATGGTTCTA G
|
|---|
| Protein sequence | MQRSSLARRA FTAATKPNIE TSTLSNGLRL VTDSTPGHFS ALGAYVDAGS RFENPNKPGL
SHICDRLAWK STEKYSGMEL IENLAKLGGN YMCSAQRESV IYQASVFNKD VEKMFDCIAQ
TVRAPRFTDQ ELFETLQTAE YEVNEVSLKH DMFLPEVLHS AAYQNNTLGL PLFCPPERIP
EIGKSDIINY HNQFFQPQNI VVAMVGVPHE HAVKLAEKQF GDWKPAKSYR PDFGTVKYTG
GEISLPFQPP IYSNMPELYH MQIAFETTGL LSDDLYALAT LQKLLGGGSS FSAGGPGKGM
FSRLYTRVLN QYAYVENCMS FNHSYIDSGL FGITISCSPN AGHVMSQIIS FELSKLLEKD
PAKGGLTEKE VKRAKNQLIS SLLMNIESKL ARLEDLGRQI QCQNKITTID EMIQKIESLS
LEDLRVVAEK VLTGSVITKG ISSGQPTVVM QGDRASFGDV EFILRHYGLG KFQGPPLEEP
RDFSKIEKPH RFGKWF
|
|---|
| |