Gene PICST_48631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48631 
Symbol 
ID4840260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1414685 
End bp1415983 
Gene Length1299 bp 
Protein Length433 aa 
Translation table12 
GC content43% 
IMG OID640391575 
Productpredicted protein 
Protein accessionXP_001385621 
Protein GI150866129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTCAAGATGT TGATAGTATA CATACTGATA TTCTCTGTCT TCATAGGAAT TCTTTCCATT 
TACTGGGGTA CTCTCTACAG AAGAGACACA AGATACAAGA ACATGGGCTT TCTAGTTGTA
TCTGAAGACT TGCCCTTTGA AGTTGATGGA AGCAGGTTAG ATCCGTTCTT AAACGATGCA
TTTTTGTCCA TGATCCAAAA TAACGAGACA GTCATAAATT TAGCAAAATG GGAACAAATT
ACCTTGTCAG AGTTCCAGGA ATCGGCCAGA GCCCATAATA ATAACATTAC TGCTGAAGTG
TACAGAAAAG TACACCACCA GAAGTACTGG GCTGCCGTGC ACATCAAGCC CAATGCTTCA
CAGCTCATCT ATAGAAGTTT GGCCACGGCA AATTTCTCAT TGACAGCTTC TGGCGAGATC
ACGGAGCTTA TAGATGTAGT ATACGAATCA GGAAGACAAT ATTCAGCATT AAGTCAGTAC
GTCAGTAAGC ATATTAGTCA GATAGAAGAC GTTTGGCTCA GTTCGTACGT TTCGCAAATG
ATTTATGAGC CAATAATAAA GTCATTGAAC GATACTCAAC GTTTGGCTCT TTTGGCCAAC
AACAATACCA TCAGCATTCT AGCCTCAAAA CCCGCATTCA ATATCATTGA CTTGCGACCA
TCTCCGTCTT CAGCTGTGTT GGGACCATCG GAATTGGGAT TGATCTATGC CCTCCTCTTC
TCCTTCCATC AGTTCAATTT CTCTCTAGAA ATTTATAATT ACATTCGGAC CAAGTTGAAG
TTCAGACATT ACTTGGTCTG GCGTTTCGTT GCTTCTCAGA TTAACTGTCT TGTGCTTGCG
TTGGTTTATT CGCTCATTAC CATCGCTTTC CAAGTGCCTA CGAACGTAGC CTTTGGACAT
TCGGGGTTTG TGGTGCTCTG GATGTTCATG TATTTGTACA TCTCAGCCAG TGGTGGTATA
AATGAAAACG TCGTCACTGT TATTTTAGCC TTTGACCAGA AGGTGTTCTT AGCGCCGTGG
ATGATCTTCA ATATTGTCAT CAATATATCG TCCACTTTCG CACCGTTTGT GCTTATGCCT
GGCTTCTACA GATATGGCTT TGCTTTGCCC ATGTACAACA CGTATGAGGC GTTGAAAGTC
GTGTTTTTCG ACACCTGGAA GGGCAACTTG GGTCGCAACT TGGGTGTTCT TGTAATCTGG
ATCGTTGTAA TGAACATCGT CCTTGTCTTC AACGTGCAAT GGGCCAACAA CAGAGCCAGG
AGAATCGCAA CCGAGAAGAA GGAAGCAGAA AAGGAAAAG
 
Protein sequence
FKMLIVYISI FSVFIGILSI YWGTLYRRDT RYKNMGFLVV SEDLPFEVDG SRLDPFLNDA 
FLSMIQNNET VINLAKWEQI TLSEFQESAR AHNNNITAEV YRKVHHQKYW AAVHIKPNAS
QLIYRSLATA NFSLTASGEI TELIDVVYES GRQYSALSQY VSKHISQIED VWLSSYVSQM
IYEPIIKSLN DTQRLALLAN NNTISILASK PAFNIIDLRP SPSSAVLGPS ELGLIYALLF
SFHQFNFSLE IYNYIRTKLK FRHYLVWRFV ASQINCLVLA LVYSLITIAF QVPTNVAFGH
SGFVVLWMFM YLYISASGGI NENVVTVILA FDQKVFLAPW MIFNIVINIS STFAPFVLMP
GFYRYGFALP MYNTYEALKV VFFDTWKGNL GRNLGVLVIW IVVMNIVLVF NVQWANNRAR
RIATEKKEAE KEK