| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_48230 |
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| Symbol | |
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| ID | 4839931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 523497 |
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| End bp | 527483 |
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| Gene Length | 3987 bp |
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| Protein Length | 1328 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391246 |
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| Product | hypothetical protein |
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| Protein accession | XP_001385451 |
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| Protein GI | 150866002 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.348579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGGAC GTTTGAAGGA CAGCGCTCGT GCCCAGAGCA CCCTGTCGCT GATTCTTCTA
GCAGACAACA AGCACTACGA ATCGATTGAT CTCACGAAAC TCTACGAGAG CGTGCTAAAG
CTAGTAATCT TGGAATATTG CAACGAAGCC CGATTTCGAA CCCCATTACC ACGTCCTGCT
CCATCTCCTA ACGTTTCGGC CGCTTCCTCC AACTCTTTAT CGTCATCACT GTCGAAGTTC
TATATGAAAT CACGTAGTCT GGATTCCAAC AAGGATGTGA AGCTACCAGC CAATTTCTTA
GCCAACCTCG AAAAACGGCT CAATCGTATC GCCTTTAAAA AGGAAGGTCA TCTGCTCGAT
GATGCCACCA GAAGATCGTT TCTCGCCTTT TACAACGAAC TCTTGAAGCC ATCGTTCAAA
TCTGAGCTCG AGAAGGTGAA CAAACCAGAA TATGTGGTTA TGAAATTCGT AGCCCTCGCC
AATAAAGAGC TTGTCAAATT GGATACAGTT CCACAACATG ATATCAGCGT TGCTGTCTTC
AAACAGGAAG AGACTTTCGT ACAACAATTG ATCGAATTGG TGACTAAGGA TAAAGATAGT
GAAGCAATCA TTGAAAGACT CCAGGAGACA AGGGACTCTC TAAAGCCAAC TAAAGTGTCG
CTGTCGACCT CGGCCATGGG CAACCTCTCA ATTCTGGACT CAAATGCTCA GTATCCGAAG
CCTTCGTTCC GTGTAACAGA CATGAACATG TCGTGGATCG AATTGCTTCA GAAATTGTTC
TCATTAGATC AGGTCAAGAT CCAACAGGAT GTGTTCAGAT TGAAAGATAT TGCCCAAGAA
AAGCCTCTTC AGAAAGATAT CCAACAAGTG CTCTTTTTTT TAGACAAGAA TTTGGGCCTG
TTCGCACCGG AAAGCTTCAC TTCAAGAGAT GCCTACCAAA GTTGGAAAGA AAGACAGATT
GCGTTCTGCG AGCAACTCCA AAAGAAATAC CAAGTACCAC CTGCAATGAA ATTACTACCG
ATTCCACCAG TGCCCGAAAA AGAGGATTTC TACGTGTTTC CCAGAACGAC GTTGACCAGA
CTGTATTTTG TTATCATGAT AAAGCTTTGT CTAGAATTAG AACTCAAGGA GAATCCCGGT
GCAATTTCTG ATCCCGATAA AACTATCTTT TCCAAAGCTG AAATAAGCTT GCTCAACGTC
TGTGCCAGAG TATGGCGTTT AGACTATACA ACGAGGTCGA CGGCTATCTT CACTGCTAGC
CATTTATCGG GCGTCTTGAA AGATAAGTTA ATGCCTGTGG AAAACGCTAA AGATGTGGGA
CCGATCGATC TTGGGGCAAC CATAAAGATT TTCCACTATT GCAAGAAGAT TACCGAGGAT
GGTGTACTAG ATTGGGATGC CAAAGATACG TGGTCTTTGA GAGATCAAGA TGAATGGTTT
AAGAATTTGA CCTTTTCATA TAATCAAGCT ATGTTTTCTA TTAAAGACTG TCTCCAGATG
ATCTGTAGTA AGACTGTTCG TCCCAAGTTT GGTCCATATC TTGCTATATT GGGAGACTAT
ATTGAGTCAG ACTGTTTATT TCGCAGAGTG GAGGAGTCTG GTTTGGTTAG GAAATGGGAA
AAGAAACTTA GTAAGTCACT CATAAATGTA GCTGGTGCTA GATACGCTGA ATTGGTTGGA
ATAGTACCCA GAGACGATAC GCTTAATATT CTGCATGTTC TTGATATTTC TGAAAACATG
GTCAGCGATA TCAGGACTCT TCAGAAACGG TACAAGAATC CATTGTTGGG GTTCCTAGAC
GTTTCTCGTG TCGTTGCAGC TGTTTTGACT ACAATGTATT CGGCAGACGC CAAACATATT
CTCGATCATA TCAAAGCGTA CGCTGCAAAT AGAGGGGAAT TTATACATTA TGGTGATGCA
ATGGAGGCAT ACAAATCTTT GAGCGAGATA CGGTTTATTC ACAATCAAGT TAGCGAACCT
GATTCTGCAT TTAAATTTAA TTTGGAAAAC TTCTTCTACC CGTATCTTGA ATCTTGGGCA
GATGAAAGCG GTCAGAAGAT CTACGATATC GTTAATCGAT CTATTGAAAT GGACTCTTAT
GAACCAATTG ACTTGGAAAG AGATGATAAG AAATATAGTT CTTCAGTTTT GGATATGTTT
TCACTCATTA AGCAATTCTT AAATATTTTA AAGAGTTTGA ATTGGGCTAA TGAATATCAG
CTTGCAAAGG TATACACAAA GTTACTCAAG AGTATATCCG ATGGAACATT GCATTATGCG
AATAGCATTA CAGAGAAGAT TATAAAAGAA CTCGATGAAG AGGAGCAGAA GCGACTCTTG
CAGTTACAGG AGGCAAAGCT TGACGCTAAA AAGGGTGGCG CTGGGGGTTG GTTGAATGAA
GTGAAAAGTG TAGTGTCAAA TATCCAGAAC AGTTCGAATA AATTGGATTT GGAAGAACCT
TATAATTTCA AACCGGAGAC TTGTGTGGCG TTGAATAACT TGTCGGCAAT GATGGAGCAA
TTGGCTAGAT TGGAAGACGT TTTGGATCCA GAGCAAATTT CCAATTCAGT GAGTTCTTAT
GATCCAAAGT CCAAAAAGAG CTACCTGAGT CATGTGGTTT CATTACGTTT AATTCGAGCA
GAGAACTTGA AAACTTCAAT TTCTGCTGTT TCTGGAGCCC CATCAACGTT GCGTCCATAT
GTTACATTGA TAGATACAGC AGCAAGAAAG ACGATAGGAA AAACAAGAAC TATGAATCAT
ACCACTGAGC CTGAGTGGGA TGAAGAATTT GAAATGAACT TGCATCCAAA TACGTCATTA
ACAATCTCTG CGACTGTCTG GGATGAGAAA TTTGGAACTC ATTCACTTTG TGGGAGAGCA
CTTATCCAAT TGGACCCAAG AAGATTTAAA CATGATGGTA TTCCTCAAGA GATTTACTTG
GACTTGGATA CCCAAGGTAG GTTATTAATT GAAATTGCGG TAGAAAGTGA ACGTGAAGAT
GCTGTATTTG TTATGGGCAG AGCGTTTAGA ACCCTTAAGA GATCCCAGGA GAGATGTATC
AAATTGATTG TGGAGAAGTT TTCTCGATTT ATCCATTACT GCTTCTCAAG ATCCAATTTG
AGATCAATCT GTGGAAACAA TGGGAACCTT AAACCCACAG AAGAGCAAGT TCATGATGCC
ATGATGCCTC TATATGATTA CTTGAATATG AACTTGAAGG TTCTTGCCGA GTACTTAACA
AATGAACTTC TTCTAAAGGT AATGCTTGCA GCCTGGATTG TCGTCCTTGC AAGTGCGGAC
GAGTTATTGC TTCCCAAGCT AGCCAGTGCA AAGACGTTCC AACTCACAGC ACAAGCTCCA
CCTGCAGCTT CAGGCTGGCA AACTGCAGTT TCGTCTGCTG TCGCCAACAT CACAAGTTCA
ATCGGAATCA GTGGCTTTGG AAAGATGCTC ACTAACAATG AACTTGAAAC GGTATTTTTG
TGGCTCCACT TTCTTTGTAA AGAATTCTTC CACAATGATG GCTATGGTCT ACCTATGCTG
GATTTAAAAA ATGAACAATA TCAAGCATTG CTTGTGTTAC CGGTTTACTA CGATAGTAGA
CTAGACTACT TAGAGCAGGA AGTTGATAGA CTTTCACCAG CTTTTGTATC TGCCTTAAGA
AACAGAAACA ATTTCGACAA CGATGCTTCA TTGCCATCTA TCAATGGTGC ACAGAAAGGG
CTTTCTCGAG CTGGAAGCTT GATTCGGAGT AAGACTATTA TGGCTAATGC CACATCAAAA
TCGAGAGAAA AGGCTATGAG AGAAGCAAGA GAAGCGAGAT CGGAAATAGT CACTCAGACA
ACTATTGAAG ATATCATTTT GAGAATCTTA ATCATCAAGG GAGAACAAAA GTACGTAGCC
AAAAGACTCG ATCAGAGAGA GAAGTTGGCA CATAGTATTG CAACTCAACG ATTAGCAAGG
GAAGCCGCTG AAGGAAGATT TAGGTAG
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| Protein sequence | MLGRLKDSAR AQSTSSSILL ADNKHYESID LTKLYESVLK LVILEYCNEA RFRTPLPRPA
PSPNVSAASS NSLSSSSSKF YMKSRSSDSN KDVKLPANFL ANLEKRLNRI AFKKEGHSLD
DATRRSFLAF YNELLKPSFK SELEKVNKPE YVVMKFVALA NKELVKLDTV PQHDISVAVF
KQEETFVQQL IELVTKDKDS EAIIERLQET RDSLKPTKVS SSTSAMGNLS ISDSNAQYPK
PSFRVTDMNM SWIELLQKLF SLDQVKIQQD VFRLKDIAQE KPLQKDIQQV LFFLDKNLGS
FAPESFTSRD AYQSWKERQI AFCEQLQKKY QVPPAMKLLP IPPVPEKEDF YVFPRTTLTR
SYFVIMIKLC LELELKENPG AISDPDKTIF SKAEISLLNV CARVWRLDYT TRSTAIFTAS
HLSGVLKDKL MPVENAKDVG PIDLGATIKI FHYCKKITED GVLDWDAKDT WSLRDQDEWF
KNLTFSYNQA MFSIKDCLQM ICSKTVRPKF GPYLAILGDY IESDCLFRRV EESGLVRKWE
KKLSKSLINV AGARYAELVG IVPRDDTLNI SHVLDISENM VSDIRTLQKR YKNPLLGFLD
VSRVVAAVLT TMYSADAKHI LDHIKAYAAN RGEFIHYGDA MEAYKSLSEI RFIHNQVSEP
DSAFKFNLEN FFYPYLESWA DESGQKIYDI VNRSIEMDSY EPIDLERDDK KYSSSVLDMF
SLIKQFLNIL KSLNWANEYQ LAKVYTKLLK SISDGTLHYA NSITEKIIKE LDEEEQKRLL
QLQEAKLDAK KGGAGGWLNE VKSVVSNIQN SSNKLDLEEP YNFKPETCVA LNNLSAMMEQ
LARLEDVLDP EQISNSVSSY DPKSKKSYSS HVVSLRLIRA ENLKTSISAV SGAPSTLRPY
VTLIDTAARK TIGKTRTMNH TTEPEWDEEF EMNLHPNTSL TISATVWDEK FGTHSLCGRA
LIQLDPRRFK HDGIPQEIYL DLDTQGRLLI EIAVESERED AVFVMGRAFR TLKRSQERCI
KLIVEKFSRF IHYCFSRSNL RSICGNNGNL KPTEEQVHDA MMPLYDYLNM NLKVLAEYLT
NELLLKVMLA AWIVVLASAD ELLLPKLASA KTFQLTAQAP PAASGWQTAV SSAVANITSS
IGISGFGKML TNNELETVFL WLHFLCKEFF HNDGYGLPMS DLKNEQYQAL LVLPVYYDSR
LDYLEQEVDR LSPAFVSALR NRNNFDNDAS LPSINGAQKG LSRAGSLIRS KTIMANATSK
SREKAMREAR EARSEIVTQT TIEDIILRIL IIKGEQKYVA KRLDQREKLA HSIATQRLAR
EAAEGRFR
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