| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47832 |
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| Symbol | AMD2 |
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| ID | 4839763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 4350 |
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| End bp | 5975 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391078 |
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| Product | Acetamidase |
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| Protein accession | XP_001385336 |
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| Protein GI | 150865924 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCAC AAGAAGTAAA TGACTGGAAG TTAGCCGCAG AGTTAAAGAA ACAATCCTTA
ATCCTGTCCA TTCCTGAAAA ATGGAGAATT GCTGACATCA AGACTCAGAT GAAAAATGCT
GGATATGTAA ACCCTCATTT ATTCTTGGAT TCGATTTTAC CTAAGGACGA GGTTATCATT
ACCAATAAAC ATCTTCATGA ACTAAGAGTT CTAATAAAAA AGGGCACTCT TTCTGCGTAC
TCTGTAACCG AAGCGTTCTG TCATCGATCA GCTTTGGCAC ACCAGCTACT CAATTGTTGC
ATTGAGATCT TCTATGTCGA AGCTTTGGAA AAGGCACAGA AGTTGGACGA TTACTTTGCA
GTAACAGGTG ATGTCAAGGG TCCCTTGCAT GGGATTCCTA TCTCCTTGAA AGACCAGGTA
GACTTACCAG GCAAAGATTC GTCTATTGGT TATGTTGGAC TCCTAGGCCA GCCAGCAGGA
CAAATTGCAC TTATGGCCAA AGTCCTTGAA GATATGGGAG CTGTGTTCTA CGTGAAAACT
GCAGTCCCTA TGGCTATGAT GCTACCAGAG ACTTACTCAA ACCTACATGG ATACACATTC
AATGGGGTGA ATATTAACCT ATCACCTGGA GGGAGTTCCG GGGGTGAAGG CTCATTGATT
GGAGCTGGTG GGTCATGTAT GGGCTTCGGT ACAGATATTG GGGGAAGCAT CAGAATTCCT
TCTGCCTTTC AGGGCCTATA CTCTTTAAAG CCTTCTGTTG GGAGGTTTTC ATATCTGGGT
GTCACTAATT CTTATTCAGG ACAAGAAGTC GTTCCGTCGG TCATTGGTCC AATGTCTACT
TCTCTCAAAG ATATACAAAT CATCACAGAA TTAATTGTTG CAAGTGAAAC ATGGAACAAT
GACCCAAAAG TGATGCCTAT ACCTTGGAGA GATATGTCTC ACCTCAAAGA CACACCTTTA
ACCATTGGTA TCTGGAGATT TGATGGAGCC GTCATGCCTC ATCCACCTAT TCAGAGAGCT
CTTAGACAGG TTGAAGCACA CTTGAAAGAA AAGGGTCACA AGATTGTTGA ATTAACTTTC
CCATTGCAGT CACAAATACT TTCTACTATT AGTAGAGTAT TTGGAGCAGA TGCAGCATAT
GATGTTGAAA GTATATGTGC CATCAGTGGA GAGCCAATAG TACCAACAGT GAAAGAAATG
ATCCAATGTG ATGATATCAA TGAACCAATT ACGGTTAACG AATGGTGGAA CCTTGCTGAC
GAGGTGTATG GATTGAAGAA GCAGTTTTAT GAATATTGGA AAGATAATTC TTTGGATGCT
ATCTTGGCTC CGGTTTGGCC ATCGACGGCC AGTTTACCTT ATGGACAACC TACTATTAAC
TACACAGCTC CTTTCAACTT ATGCGATTGC TGCTCTGTAG TGGTCCCGAT AACAAATGTG
GATCGACTTA TTGACGAGAT TGATACTTCT TATGTGCCAA TTAATCCCGC TGACAATCAC
ATGTATCAGT CATACGATCC AGATTTATTT GACAAGATGC CCGTATGTCT TCAAGTGGTC
ACTAAGAAGT TAGAAGAAGA GAAGGCACTC GTAGTAGCAT CAATTATCGA TGAGATACAC
AATTGA
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| Protein sequence | MIAQEVNDWK LAAELKKQSL ISSIPEKWRI ADIKTQMKNA GYVNPHLFLD SILPKDEVII
TNKHLHELRV LIKKGTLSAY SVTEAFCHRS ALAHQLLNCC IEIFYVEALE KAQKLDDYFA
VTGDVKGPLH GIPISLKDQV DLPGKDSSIG YVGLLGQPAG QIALMAKVLE DMGAVFYVKT
AVPMAMMLPE TYSNLHGYTF NGVNINLSPG GSSGGEGSLI GAGGSCMGFG TDIGGSIRIP
SAFQGLYSLK PSVGRFSYSG VTNSYSGQEV VPSVIGPMST SLKDIQIITE LIVASETWNN
DPKVMPIPWR DMSHLKDTPL TIGIWRFDGA VMPHPPIQRA LRQVEAHLKE KGHKIVELTF
PLQSQILSTI SRVFGADAAY DVESICAISG EPIVPTVKEM IQCDDINEPI TVNEWWNLAD
EVYGLKKQFY EYWKDNSLDA ILAPVWPSTA SLPYGQPTIN YTAPFNLCDC CSVVVPITNV
DRLIDEIDTS YVPINPADNH MYQSYDPDLF DKMPVCLQVV TKKLEEEKAL VVASIIDEIH
N
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