Gene PICST_47663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47663 
Symbol 
ID4839891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp67809 
End bp68828 
Gene Length1020 bp 
Protein Length339 aa 
Translation table12 
GC content41% 
IMG OID640391206 
Productpredicted protein 
Protein accessionXP_001385703 
Protein GI150866194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTG CAGATCCTGC TGTAGCAGAA GAAGAAGTCA CCAAAGACAC ATCTGTTCAG 
AACGCTTTCT CAGAAGAACA TGATAACAAA ACCGAAGAAA CGGTCCAGAA ATTAGAACTG
GAAATCAATA ATATGTACAA CGCCTTGGAA AGCAAGTTTC TGGATTTGTG GTCCAATGCC
TCGAAGAATG CAAGCGACTT GCAAGCCAAA TACAAGTTGG ACGAACGTAA GGAGCAGTTG
CTTGGACAAT TGAACTCTGC AAGAGAAAGT TTGAAGAATA ACAATACATT GAATGTCACT
GAGAACTTGG CCTCTATTGA AGAACAGATT AAGAAGGTAC AATTGCCTGC TGTTAAAGTA
GATATTAAGA ACTTGCTGGA ACAAGCCAAT ACAGCCCTTG ATGTTTTGGA CTCCAAACTC
GAAATCGTGG AGAATCAAGC TGGAAAATAT GTGAGTTCAT TTGCTTCTTT CCTTAGCAAT
ATGATTTCTG TGACTCCGGA AGCTCCTGTC AATGAGAAGG AGACTTTGTT CGCTTCTTCT
TCTGGTATCA ATACGCATGA AAACTACGGG ACTTCTCGTT ATGAGACTGA TTTCTACAAA
TTGCACACAA CAGAATCTTA CTACTTGACA GAGGAACTTG ATGACAAGGC AGAAGCTGAG
AAATACAGTG CTGATTCCAA GACTAAGGAA ATTTCTGAGT TGTTAGAGCA GTATCCACAA
ACATTGACCA AATTGATGAA TGAGATTGTA CCTGTTAAAG TGTCGTACAA CTTGTTCTGG
TACAGATACT TCAAGAACGA GGATAAACTT AAGGAATCCG AAAAGAAGAG AAAGGAGTTG
TTAGAAAAAA AGGGAAGCCA GGCCAGTGCC AATGACGATG ACGAAGAATT CACTTGGGAT
GACGATGAAG AAGATGAAGA AACCGTCAAT CTAAGCAAGA ATCTCAAGGA GTCCGAAGAT
GAAGCCACAA AACCAGCCAA GGAAGACCCT AAGGACGAAG AAGATGACGA CTGGGAGTGA
 
Protein sequence
MEFADPAVAE EEVTKDTSVQ NAFSEEHDNK TEETVQKLES EINNMYNALE SKFSDLWSNA 
SKNASDLQAK YKLDERKEQL LGQLNSARES LKNNNTLNVT ENLASIEEQI KKVQLPAVKV
DIKNLSEQAN TALDVLDSKL EIVENQAGKY VSSFASFLSN MISVTPEAPV NEKETLFASS
SGINTHENYG TSRYETDFYK LHTTESYYLT EELDDKAEAE KYSADSKTKE ISELLEQYPQ
TLTKLMNEIV PVKVSYNLFW YRYFKNEDKL KESEKKRKEL LEKKGSQASA NDDDEEFTWD
DDEEDEETVN LSKNLKESED EATKPAKEDP KDEEDDDWE