| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47526 |
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| Symbol | FOC1 |
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| ID | 4839680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 397952 |
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| End bp | 399283 |
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| Gene Length | 1332 bp |
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| Protein Length | 444 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390995 |
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| Product | Probable formate transporter 1 (Formate channel 1) |
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| Protein accession | XP_001384735 |
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| Protein GI | 150865496 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGA CTTACTACTT GACCACTCAC GAGACGGCTT TGGCCGTCGT GGCGACAGCG
ATGAAGAAGG CCAGACTCCG TATAGATACA CTAGCTCTCA GCTCGCTCAT GGGAGGTATC
TTATTCAGTA CTGGAGGTAT GCTCTATGTG CTAGTGGAGT CATACTGTCC AGGATTAAGA
GAATCAAACC CCGGCATCAT ATACCTTATA CAAGGAGCTT TGTTTCCCAT TGGACTTTTC
TACGTGGTGA TAATGGGTGT TGATCTTTTC AACTCCAACA TACTCTTCTT CAGTACAGCA
TTGTGCCGGG GAGCAGTTTC CTTTTTAGAC TTATTCATCA GCTGGTTCGT TAGCTACTGG
TTGAATCTTG TAGGGAACAT TTTTGTTTGC TATATCATCT GCCATTATTC GCATGTAAGC
CAGGAGCCCA GTTTCATAGA GGGCTCTATT ACCGTCGTGG AGACAAAAGT AAAGTTTTCA
TTTGTAGCAA ATCTCATCAA GGCTATCGCG GGAAACTTCT TTGTCTCCTT AGCTATATAC
TTGCAGTTGA TGGCGAAGCC ACTCCATGTC AAATTGATCA TGATGGTGCT TCCAATTTTC
AGTTTTGTAG CCATGGGCTT CACGCATGCT GTGGCAGATA TGTATTTACT TATCATGGGC
ACTATCAATG GAGCACCCGT TTCTGTGGGT GAACTTGCTT GGAAATTGTT TTTGCCTGGT
GCCTTGGGAA ATATCATTGG AGGTTCCTTC TTTGGCGTAG TGATTACTTG GTACTTACAC
TTGGTTGTAG TAGAAAGGGA CCAGAGACAA TTGCATTTGC CTCAGTATGA GGTCAGAGAC
GAACAACCCG AATTGGGTAT GGATTCTAGG GTCGTGAGAC AACAGCCTTC AGTAGAAATC
ACAGAAGAGT TCCCTACTTT GGAAGAGAAG CTTGGCGAAG AACGTTTGTC GTCTGACTCC
AGCAATTTAG AAGTCTATAG ACTGAGACTG AGACTCATAC TGAGCGATTT GGCCAGGATA
TCTTCCAGAG CAACGGGAAT CTCACGTATA ACCACAAGAA CAATTCGTAC TGCTAAGAAA
TCTCCGAAGA ATGTCTTCCC AGTGTACGGA ATGGGTCCAG CATCCCTGAA AGACCAAAAA
ATCGCATCAG GTAGAGACGA CTACGACGAT AATGACACTA ATTCGATGTA CTCAGCAAGT
CAAGAGTTGG GTCCTAATGA GGTGCCTTCG GCTGATTACA TAGGTGAACA ATTAAGAAAA
GTAATCTCAA GAAAAGGATC CAGCGCTGGA AGTAATTTGA GACGGAAAGT CAGCGATTTG
GAGTCTCAAC GC
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| Protein sequence | MDETYYLTTH ETALAVVATA MKKARLRIDT LALSSLMGGI LFSTGGMLYV LVESYCPGLR
ESNPGIIYLI QGALFPIGLF YVVIMGVDLF NSNILFFSTA LCRGAVSFLD LFISWFVSYW
LNLVGNIFVC YIICHYSHVS QEPSFIEGSI TVVETKVKFS FVANLIKAIA GNFFVSLAIY
LQLMAKPLHV KLIMMVLPIF SFVAMGFTHA VADMYLLIMG TINGAPVSVG ELAWKLFLPG
ALGNIIGGSF FGVVITWYLH LVVVERDQRQ LHLPQYEVRD EQPELGMDSR VVRQQPSVEI
TEEFPTLEEK LGEERLSSDS SNLEVYRSRS RLISSDLARI SSRATGISRI TTRTIRTAKK
SPKNVFPVYG MGPASSKDQK IASGRDDYDD NDTNSMYSAS QELGPNEVPS ADYIGEQLRK
VISRKGSSAG SNLRRKVSDL ESQR
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