| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47071 |
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| Symbol | |
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| ID | 4839441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1353935 |
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| End bp | 1355053 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 12 |
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| GC content | 47% |
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| IMG OID | 640390756 |
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| Product | predicted protein |
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| Protein accession | XP_001385264 |
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| Protein GI | 150865873 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.454401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00245237 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCCACC ACACCATGAC CTTCGAATCT AATATCATTA ACGGTAATGC TAGGAACAAC
CCTGCCACCA ATCACATCCA AATTGGAGGC AGAAAGTCCA CGCTTGCAGT GGTGCAATCC
GAAATAGTCA AGAAGGAGAT CGAAGAAGCA TTTCCACACA TTAACTGCTC GATTTTGGCG
CTTTCCACTT TGGGAGACAA GATCCAGAAC AAGCCTCTCT ATTCATTCGG CGGAAAATCG
CTCTGGACAA AAGAACTCGA GATCTTGTTG TTGGACCTGA TTGACGAGTT TCCCCAGCTT
GACTTGATAG TGCATTCCTT GAAGGACATG CCAACGAACT TGCCTGATGA GTTTGAGTTG
GGTTGTATTT TGAAGAGAGA AGACCCTCGT GACGCTTTAG TTATGAGAGC CGGATCACCT
TACAAGACGT TGGACGATTT GCCAGCAGGC TCTGTAGTGG GAACATCTTC CATCAGAAGA
TCATCGCAAC TCGTGAAGAA CTATCCCCAC TTGAAGTTCG ACTCTGTTCG TGGTAACCTT
CAGACTCGTT TGAGCAAATT AGACGACGAC TCCCAACCAT TCGAGTGTAT CATTTTGGCA
CTGGCTGGCT TAATCAGAGT TGGTTTGGGC CACAGAGTTA CAGACTATTT GAACGCTCCA
CACATGTACT ACGCCGTTGG CCAGGGAGCT TTGGGTGTAG AAATCAGAAA AAACGACACC
AAGATGAAGA ACATCTTGGC TAAGATACTG CACATCCCAA CATCCCTCTG TTGTTACGCA
GAGAGATCGT TGATGAGATA CTTGGAAGGA GGGTGTTCCG TGCCGATAGG TGTTCACACG
AACTACGATG AAGACTCGAA GGTGTTGAAG TTTGAGGCTA TCATAGTCAG TCCCGACGGA
ACTCAGTTTG TGGAAGACGA ACTTGAAGCT CAAGTCGAGA CCTTGCAACA GGCCGAAGCC
TTGGGTATAC AACTAGGCGA CAGACTCATC GCTAAGGGTG CAAAGGATAT CTTGGACAAG
ATCGACTTCA ATAGAATCAA CCAGGCTCCT AGCACCATCA ACACACCCAC TCCATCCATA
GCTACCTCCA TAGAGGCCGT CGTTTCTACG GCTAACTAA
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| Protein sequence | MPHHTMTFES NIINGNARNN PATNHIQIGG RKSTLAVVQS EIVKKEIEEA FPHINCSILA
LSTLGDKIQN KPLYSFGGKS LWTKELEILL LDSIDEFPQL DLIVHSLKDM PTNLPDEFEL
GCILKREDPR DALVMRAGSP YKTLDDLPAG SVVGTSSIRR SSQLVKNYPH LKFDSVRGNL
QTRLSKLDDD SQPFECIILA SAGLIRVGLG HRVTDYLNAP HMYYAVGQGA LGVEIRKNDT
KMKNILAKIS HIPTSLCCYA ERSLMRYLEG GCSVPIGVHT NYDEDSKVLK FEAIIVSPDG
TQFVEDELEA QVETLQQAEA LGIQLGDRLI AKGAKDILDK IDFNRINQAP STINTPTPSI
ATSIEAVVST AN
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