Gene PICST_47064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47064 
Symbol 
ID4839556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1170893 
End bp1171489 
Gene Length597 bp 
Protein Length198 aa 
Translation table12 
GC content45% 
IMG OID640390871 
Productpredicted protein 
Protein accessionXP_001384901 
Protein GI150865611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.131111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCA TATTGCGTTG GTACAACCAG TTGCTTCTTC GCAGGCCCCT TCTCACCAAT 
ATGATTTCCA CAGGGTTTCT CTTTGGCAGT GGAGACTTTT TGGCACAGAG ATTGTTTCCG
CCTCAAGATG GTGAAATACC TCCTTACGAC TACTTGCGGA CATTGCGAGC AGTGACGTAT
GGGTCTATAG TGTTTGCCCC AATTGGGGAT CGCTGGTATA AGCTCCTAAA CAGAATCAAG
ATGCCTGTGA GGATCAGAAA AGCCAAAGTT AACAACATGG GAGATACGCT TTTGAGAGTG
GGAGCCGACC AGTTGATATT TGCACCCTTC ATAGGGATTC CGCTCTATTA CCTGGTGATG
ACAGTATTTG AAGGACATCC TGAGATCATC CAAACGATTC GCTACAAGCT TGATACCAAC
TGGTGGAATA CATTATGGTC TAACTGGTTG GTGTGGCCAC TTTTCCAATT GTTCAACTTT
TACTTGTTGC CCACGCACTT CCGACTCTTA GCAGTCAATG TGTTCAGTAT AGGCTGGAAC
TGCTACTTGA GCTACTTGTT GAACTGGAGA GATGTGAAAA TAGGGCTGAA CGAATGA
 
Protein sequence
MSSILRWYNQ LLLRRPLLTN MISTGFLFGS GDFLAQRLFP PQDGEIPPYD YLRTLRAVTY 
GSIVFAPIGD RWYKLLNRIK MPVRIRKAKV NNMGDTLLRV GADQLIFAPF IGIPLYYSVM
TVFEGHPEII QTIRYKLDTN WWNTLWSNWL VWPLFQLFNF YLLPTHFRLL AVNVFSIGWN
CYLSYLLNWR DVKIGSNE