Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_47064 |
Symbol | |
ID | 4839556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1170893 |
End bp | 1171489 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390871 |
Product | predicted protein |
Protein accession | XP_001384901 |
Protein GI | 150865611 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.131111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCA TATTGCGTTG GTACAACCAG TTGCTTCTTC GCAGGCCCCT TCTCACCAAT ATGATTTCCA CAGGGTTTCT CTTTGGCAGT GGAGACTTTT TGGCACAGAG ATTGTTTCCG CCTCAAGATG GTGAAATACC TCCTTACGAC TACTTGCGGA CATTGCGAGC AGTGACGTAT GGGTCTATAG TGTTTGCCCC AATTGGGGAT CGCTGGTATA AGCTCCTAAA CAGAATCAAG ATGCCTGTGA GGATCAGAAA AGCCAAAGTT AACAACATGG GAGATACGCT TTTGAGAGTG GGAGCCGACC AGTTGATATT TGCACCCTTC ATAGGGATTC CGCTCTATTA CCTGGTGATG ACAGTATTTG AAGGACATCC TGAGATCATC CAAACGATTC GCTACAAGCT TGATACCAAC TGGTGGAATA CATTATGGTC TAACTGGTTG GTGTGGCCAC TTTTCCAATT GTTCAACTTT TACTTGTTGC CCACGCACTT CCGACTCTTA GCAGTCAATG TGTTCAGTAT AGGCTGGAAC TGCTACTTGA GCTACTTGTT GAACTGGAGA GATGTGAAAA TAGGGCTGAA CGAATGA
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Protein sequence | MSSILRWYNQ LLLRRPLLTN MISTGFLFGS GDFLAQRLFP PQDGEIPPYD YLRTLRAVTY GSIVFAPIGD RWYKLLNRIK MPVRIRKAKV NNMGDTLLRV GADQLIFAPF IGIPLYYSVM TVFEGHPEII QTIRYKLDTN WWNTLWSNWL VWPLFQLFNF YLLPTHFRLL AVNVFSIGWN CYLSYLLNWR DVKIGSNE
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