| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45688 |
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| Symbol | |
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| ID | 4838497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1023936 |
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| End bp | 1025048 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389812 |
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| Product | predicted protein |
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| Protein accession | XP_001384153 |
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| Protein GI | 126135258 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00286555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.102128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCA CAACTAAGAA AGTCGTTATA ATTGGAGGAT CATTTTCTGC TATATTAGCA
GTGAAGATCT TAGTTGGTTC AAAGAAAACT AATAATATCA ACTTAGACAT TTCTGTTGTT
TCACCATCCG ATAAGGCATA TTTTGTCATT GCCACACCAA GACTTCTCTT TGAATCTGAG
AAGGTGGATG ATACCTTATA TGATTTAGAA ACTACCATTA AGAAGTACGC TAAGGGAACC
AATCATTCTA CAACGTACAT CAAAGCAAGT GCCGTTGATG TCGACTTAGG CAAACAAGTT
GTGTCATTAA GTTCAGGTAG CAAACTTAAC TATGACAACT TGATTGTTGC TTCTGGAAAT
AGGAGCGAAC ACCCTGCTTT CAAGTTGGGA AACAAGACAG ATGCCTCTTA TACTATTGAA
TCTGGAAAAG AGTTGGCAAA GTCCATCAGA TCCGCGAAGT CAATTGCTGT CATTGGAGGT
GGATCAACTG GAGTTGAACT TGCTGGAGAA ATTGCTTATG TCTATGGTCA GAAGAAGAAT
ATTAAGTTAT ATACTGGTTC CAGTCAACCA TTGCCTTCTT TGAGCAAGTC TGTTGGCAAC
AAGGCTACTA AACAGCTCCA GGACTTGAAT GTCGAAGTAA TCAACAACCG CAGGGCCAAG
AATATAACCA AAACTTCCAT CGAATTCAAC GACGGAAGTG TAGAAAAATT CGACTTGGTG
ATACCCGCCT TCAAGTACAC TCCAAATTCT GAATTTTTGC CTAAAGACGT TCTTGACAAA
AACGGTTATG TTGTCACTGA CAAGTACTTC AGACTTGAAA ATTATCACAA TGTAATTGCT
GTTGGTGATG TCATTTCGAT GGGTGTCAAG AGTCTAGTTG ATCTTATGTA CTTCCAGAAG
GCAGGTCTCG AGAATGTGAT CAACTACGAA GTGTTTGAGA ATAGTTCTAC CAAACTAAAG
GAATACAAGC AACCAGGCAT AATGCTTGTT GTTCCTATCA GTAAGAAAGG TGGTGTCGGT
TCGGTTTATG GATGGTCATT ACCTAATTTT GCTGTTTCCT TTCTTAAATC CAAAGACTAT
ATGATTTCTA AATCTGCAGA CAGCTTGTCC TAG
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| Protein sequence | MTATTKKVVI IGGSFSAILA VKILVGSKKT NNINLDISVV SPSDKAYFVI ATPRLLFESE
KVDDTLYDLE TTIKKYAKGT NHSTTYIKAS AVDVDLGKQV VSLSSGSKLN YDNLIVASGN
RSEHPAFKLG NKTDASYTIE SGKELAKSIR SAKSIAVIGG GSTGVELAGE IAYVYGQKKN
IKLYTGSSQP LPSLSKSVGN KATKQLQDLN VEVINNRRAK NITKTSIEFN DGSVEKFDLV
IPAFKYTPNS EFLPKDVLDK NGYVVTDKYF RLENYHNVIA VGDVISMGVK SLVDLMYFQK
AGLENVINYE VFENSSTKLK EYKQPGIMLV VPISKKGGVG SVYGWSLPNF AVSFLKSKDY
MISKSADSLS
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