Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_45639 |
Symbol | |
ID | 4838656 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1494996 |
End bp | 1496024 |
Gene Length | 1029 bp |
Protein Length | 330 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389971 |
Product | predicted protein |
Protein accession | XP_001384589 |
Protein GI | 150865391 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAAGA GGTATATCGA GCGGAAAAGA GTGTATTCCG GACATGTTCT GGACGTGTTC CGAGCGCGGG ATATCAGTTC CGGTCAATTG GTCTGTTTAA AGGTTGTAGA CGGTGATATC AGTATCAAGC CTCATAGTAT GAAGAGAGAA ATCACCATAT TGAAGGAGCT AAAAGGCGGA AGTAACATTC TTCAGTTTCT AGACTGGTAC GAATTGTTTG ACGATGTGGT TATGGTCAGT CGTTGGTACG AATACACGCT TGTGTCGTTG CTCCAGAATG CAAAGTATAG TCGTAAGGTA ACGAGGTTTG ACTTTGCCAA TCCTTTAGAC AATAAAGTTA ACATTGTAAG CAAAGTAGAT GATTTGAGTG CCAAAGGCTT TTTACAAGCG ATGGCATCTG GATTGAGCTA CATACATAAG CACGGAATAA TTCATCGGGA TATTAAGCCA TCCAATATCT TGTTCGCAGA TGATGATATA ACCAAGCCAG TGATAGGTGA TTTTGGAATC AGCTATAATG GTCCGTATAG TGACGAGTCT GACGATTGCA AGTTTCTTGA TGTGTGTACT GGCATCTACA AGGCTCCTGA GTTGTGTCTT GGTAAATGCG ACTACGGAAA CGAGATTGAT ATCTGGTCAT TGGCAGTAGT CCTTACAATA GTGTACTCGT CGGACTTCAC ATCAATTCTA GTAAAGAGAA AAGGAAATAA TGAAGAAGAG GAGGAGGAGG AAGAAAATGT TGTCAGTGAT TTGTGGCTTC TCAGCACAAT CTTCAACAAT TTTGGCACCC CTTTTGTTAA CGAAGGCCAA TATGAAGACG AGAGCCTATA TTGGCCCGAG CTACAACTGG ACAAATATCA CTTTGTCGAC TTCCAGTTTG TGCACCAGAA TCGGAAGCCA GATACTGAGT TGCTTCCAAA GTGTCGGGAT CCAGTTGCGA CCTCTGTGTT TAACGAGATG ACTAGATACA GACAGAGAAT TACTGCCCAA GAGATATGTG ACAAGCTCGC TATAGAAGAG AATAGATAA
|
Protein sequence | MDKRYIERKR VYSGHVSDVF RARDISSGQL VCLKVVDGDI SIKPHSMKRE ITILKELKGG SNILQFLDWY ELFDDVVMVS RWYEYTLVSL LQNAKYSRKV TRFDFANPLD NKVNIVSKVD DLSAKGFLQA MASGLSYIHK HGIIHRDIKP SNILFADDDI TKPVIGDFGI SYNGPYSDES DDCKFLDVCT GIYKAPELCL GKCDYGNEID IWSLAVVLTI VYSSDFTSIL EEENVVSDLW LLSTIFNNFG TPFVNEGQYE DESLYWPELQ SDKYHFVDFQ FVHQNRKPDT ELLPKCRDPV ATSVFNEMTR YRQRITAQEI CDKLAIEENR
|
| |