Gene PICST_44918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44918 
Symbol 
ID4838768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1276223 
End bp1276654 
Gene Length432 bp 
Protein Length143 aa 
Translation table12 
GC content49% 
IMG OID640390083 
Productpredicted protein 
Protein accessionXP_001384541 
Protein GI150865358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.905608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.612245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCC GTTACTCCGC TGCTGGTGCC CACCAACGAG ATCTCCGTAC CCAACTCTTT 
GCCTCGCCCA ACGGAAACAG AACGCCACCC TCTAGAACAG CATCACCATA TGAGCCATCG
GCGCTGGTCT CAGCCAAACA CAACGAGTCG TTCTTGCTGA CTCTTGAATC TCAGAACAAC
GACGAAATGG AATCTATGGG CCACAAAGTG GCCATGCTCA AAACGTTGGG TCAGAAAATG
GGAGTCGAAA TCAATAAGGG AATCAAACTC AACGATGAAA TCACAAACAC CTTCGAACAA
GGGAAGGTCA CCTTGAAGAA CACATACAAC AAGATGGTGG TGATGAGCCA GCGTGCGGGC
ATCACCTGGC GAATGTGGCT AACGGTGTTT GGACTTGTCT TTGTTTGGTT CTTCTATATC
TGGATATTTT GA
 
Protein sequence
MSSRYSAAGA HQRDLRTQLF ASPNGNRTPP SRTASPYEPS ASVSAKHNES FLSTLESQNN 
DEMESMGHKV AMLKTLGQKM GVEINKGIKL NDEITNTFEQ GKVTLKNTYN KMVVMSQRAG
ITWRMWLTVF GLVFVWFFYI WIF