Gene PICST_44816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44816 
SymbolCBR2 
ID4838868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp448779 
End bp449675 
Gene Length897 bp 
Protein Length298 aa 
Translation table12 
GC content49% 
IMG OID640390183 
ProductNADH-cytochrome b-5 reductase 
Protein accessionXP_001384046 
Protein GI150865003 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTT CCCGTCTGTT CTCCAGATTA GCCTCGTCCA AGTTTGTCTT GCCCGTCGCA 
GCTGCCGCTG TTGGCTTGGC CTCGTACTCA TTCACCTCCT CCTCGTTCAT TGCCAACGAA
CCAAGCAAGG CCTTCAAGGG TGGTGACGAG TGGATCGACT TGAAGTTGAT CTCATCTCAT
GACTTGTCCC ACGACACCAA GCATTTAGTA TTTGAGTTGC CCAACAAGGA CGATGTCTCT
GGCTTGGTCA CCGCTTCGCT CTTGATGACG AAGTTTGTCA CTCCCAAAGG TAGCAATGTC
ATCAGACCAT ACACTCCTGT TTCCGACACT GAACAAGCTG GAACTATCGA CTTTGTCGTC
AAGAAGTATG AAGGCGGTAA AATGTCCTCG CACATCCATG ACTTGAAGCC AAACGACACC
TTATCGTTCA AGGGTCCCTT CGTCAAGTGG AAATGGGAAC CTAACCAGTT CAAGTCCATT
GCCTTGATTG GCGGTGGTAC CGGAATCACT CCCTTGTACC AATTGATCCA CGAAATCACT
AAGAACCCAG CTGACAAGAC CCAGGTCTCG TTGTTTTACG GCTCCCAGAC CCCAGACGAC
ATTTTGATCA AGAAGGAATT GGATGCTCTC GCTGCTAAGC ACAAAGACCA GGTCAAGATC
GTCTACTTTG TCGATAAGGC TGATGCTTCT TGGAAGGGTG AAACTGGCTA CATCTCCAAG
GAATTCTTGC AGAAGAACTT GCCAGCCCCA GGTCCTGACA ACAAGATCTT TGTCTGTGGT
CCTCCACCTT TGTACAAGGC TGTTTCTGGT CCAAAGGTTT CTCCTACTGA CCAAGGTGAA
CTCACTGGTT CCTTGGCTGA ATTGGGCTTC TCCAAGGAGA ATGTTTTCAA GTTCTAA
 
Protein sequence
MSFSRSFSRL ASSKFVLPVA AAAVGLASYS FTSSSFIANE PSKAFKGGDE WIDLKLISSH 
DLSHDTKHLV FELPNKDDVS GLVTASLLMT KFVTPKGSNV IRPYTPVSDT EQAGTIDFVV
KKYEGGKMSS HIHDLKPNDT LSFKGPFVKW KWEPNQFKSI ALIGGGTGIT PLYQLIHEIT
KNPADKTQVS LFYGSQTPDD ILIKKELDAL AAKHKDQVKI VYFVDKADAS WKGETGYISK
EFLQKNLPAP GPDNKIFVCG PPPLYKAVSG PKVSPTDQGE LTGSLAELGF SKENVFKF