| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_44719 |
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| Symbol | |
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| ID | 4838692 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1534621 |
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| End bp | 1537806 |
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| Gene Length | 3186 bp |
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| Protein Length | 895 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390007 |
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| Product | predicted protein |
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| Protein accession | XP_001384250 |
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| Protein GI | 150865150 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5096] Vesicle coat complex, various subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00567496 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTCC AATTGCAGAA CTCCGAGGTC TTGGCGCGGT TGAAGCCCTT CGGTATTCTG
TTTGAGAAGT CGCTCTCCGA CTTGATCAAA GGGATTAGAC ATCAATCCAA GGAGTCTCCA
GAGTCTTTAC TGAACTTTCT AGATGTCGTG ATCCAGGAGT GCAAAACCGA GCTTTCAACG
ACGGATTTGG AGACAAAGGC TACGGCAGTG TTGAAGTTGG CATATTTGGA GATGTATGGC
TTTGATATGG CTTGGTGCAA CTTCCAGATC TTGGAAGTGA TGTCTTCAGG CAAGTTCCAG
CAGAAGAGAA TCGGATATTT GGCTGCGATC CAGCTGTTCA AAAACGAACA GGACTTGTTA
ATCCTTGCTA CCAATCAGTT CAAAAAGGAC TTGAACTCGC ATAATCACAC CGAGATAGGT
TTGGCACTTA GTGGCATTGC TACCATTGTT ACTCCCAATT TGGCGAGAGA CATCAACGAC
GACGTGTTGA TGAAATTGAG CCATTCGAAA CCGTATATTC GTAAAAAGGC TATCTTGGCC
ATGTACAAGA TCTTCTTACA ATATCCTGAA AGTTTGCGAG TTAATTTTAA TCGCGTTATC
GCCATGTTGG ACGACGCAGA CATTTCCGTG GTTAGTGCTA CTGTCAATGT AATCTGTGAA
ATTTCCAAGA AAAACCCGCA TATATTCATG ACAAGTTTGC CCAAATTCTT CTCCATCTTG
GAGGACACCA AGAATAACTG GTTAATCATC AGAATATTGA AGTTGTTCCA GAGTTTGTCG
CGTGTAGAAC CTCGTATGAA GAAGAAGATT CTTCCGACGA TCTTGGACTT GATCCTCAGA
ACCCAAGCAT CGTCCTTGAT CTACGAGTGT ATCAACTGTA TCGTTAACGG CAACATGTTG
AGTGCAGACT CTTCAAAGGA TAAGGAAACG GCAAAAATCT GCATTAAACA AATTATGGAG
TTCTTCAAGA CAAAGGACTC CAACCTAAAA TTCGTGGGCT TAATTGCATT AATTAGCATC
TTGAAGATAT TCCCCGTGTT TATGCACAAA GTTGATGGTG TTTCAACTAT CATAATGGAC
TGTCTCACGG ATCCAGATCT TATCATAAAG AGAAAAGCAT TGGAAATCTG CCATTACTTG
GTTCAAGAAG ATAATATAGC CGAAGTAGTA AAGGTCTTGT TGTTGCAGTT GATTCCAAGT
GATACGAACG CTATTCCAGA GGCTTTAAAG CAGGAAGTCA CTTTGAAAAT CTTGTCAATA
ACATCGAACG ACAAGTATGC GAATGTGCCC AACTTCAAAT GGTATGTGGC AGTATTGAAG
GATATCATCA ATTTGACTTT ACTTCCGCTT CCTTCTTCTT CCAATGCTAG CACGATCTCT
CCAGCAACAG CAAACGTCAT AGCTGCAGAA ATCGGTAAAG AATTCAAAGA GTTAGCCACC
AAGGTGCCTT CTATTAGACC CACAATTCTC AACAAAGTGA TTGTGGAAGC TGTTCAGGAT
GTAAGAATCT TGGACGTGTG TCCTTCATTG CTTAGGGACT TCTACTGGAT TATGGGAGAG
TATATAGACG AGTTGAGATC TCCATCCGAA GAAGAAAGTG ACGTTGAAGA CGAGGATGAT
ATTGAGGAAT CTTCTGTTTT GGACCTTGGC AAGAAGATCC AGATTTTCAA CGCGTTGGTA
AACCACGATA TAGACAAGGT ACTTGGTTTA TCTGTAAATA CCCATTTTCC AATTTCATCC
AAGTTGATTA CCTTATCTGA TTCTAATGTC CAAGTAGTGT TTATCCAGGC AATTGTTAAG
TTGTACAATG GCATTGTGAC CGATTATTTG GTGCACTATT CAGTTCAAGG GAAATTCAAG
CGGGAGCAAT TTAATCAATT GGCCCATTAT TTATACAAGT TGATCAACTT CCTTGGAAAC
TGGGAGAACC ATAGGAACTA TGAAGTTCAG GAGAGAGCTT TGTCGTGGTT GGAATTCTTG
AAGCTTTCAT TAGAAGCAAT GACACATGAA GATATTTCGG CTATCCAGAA ATTGGAAAAG
GACGAGGTTG AGTATTACAG AAACTTACCG AGATCTGAAG AAGGTGAAGA TGAAGACGAT
GAAGTTTATG ACGAAGAATC TTCGGAAGAA GAGGAAAGTG AAAATGACGA TACAGACAAC
AGCATTAAGC CAGTCAGAGA CAATGAATAC GAAAACTTGA GCTCTTCATC TGAAGAGGAT
AACGATGAAG ATGGAGATGA GAGTGAAGAA AATGGTAAAG ACGAAAACGT GGAATATCCT
AATAACGAAG TCAATGGTGG GTTTGATGGC GTTGAACATA GTCCATTTCC TGAAACAGAT
GACTTCCTTA CAGAACCTCT GAAAGAGAAT AGTTTGCCAA TGTTGCTAAC ACATATTCTT
CCATCATTTT TCAAGAGTTA TCCTTTGAAC CCAATTGCAA AGAACTCACA GAAAAAGATT
CCTATTCCAG AAGATTTGAA TCTTGACGAG CCAATCTACA CCATTCCATT TGATGTGTCT
GCTGATGACG TTGACAGTTT TGTCAATGAT GAATATGATT TATTCATTGA AGACGAAGTT
GATTTACATG CTGAAGAAGC ATCTTTGATC AGTTTGTCTA ACAGAGGCAG TGACGATGAC
TTGAAGAAGA AACAGGAGAG ATTGGAGAAA TTGAGAGATG ATCCATACTA TCTTGGATCC
AAGAAGTCTT CTAAGAAGAA GTCTATTAAC AGGAGAGTTC TCTTGGTCGA TGAAGACAAG
ACCCCAAGCC CAGAAAACTT CAGTGAGAAG GGTTCGATTA ATTCAGGAGT TGCTCCTGTC
AAGGAGAGAA AGAAGAAACC GTTGAAGATG AAGAAGGATA AAGTGGTCAT CTTGTCGGAA
GAGACAATAG AAGGTGGTCC AGATGAAGAA GAAGATGAAG AAGCCACTGC TGTTAAAGCC
AAGTCCAAAA AAAAGAAGAG TAACTTTATG ATTGATTCGT CGAATTTGGA TAATTTCGAT
CTTACTTCTT CGGCCATGTC AGAGTCGGTC TCTGGTTTGG ACAAGGACTA CGAGTACAAC
ATTGATTTGG ACGAGTTAAG AAAGAAATTG GCCCTGTCTT CGTTGAAAGA CAAGGAGAAG
AAGGAAAAAA AGGAGAAAAA GAAAAAGAAA AAGAAGAGTT CCGCTTCTAA CGTTGAAAAA
ATCAAA
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| Protein sequence | MSFQLQNSEV LARLKPFGIS FEKSLSDLIK GIRHQSKESP ESLSNFLDVV IQECKTELST
TDLETKATAV LKLAYLEMYG FDMAWCNFQI LEVMSSGKFQ QKRIGYLAAI QSFKNEQDLL
ILATNQFKKD LNSHNHTEIG LALSGIATIV TPNLARDIND DVLMKLSHSK PYIRKKAILA
MYKIFLQYPE SLRVNFNRVI AMLDDADISV VSATVNVICE ISKKNPHIFM TSLPKFFSIL
EDTKNNWLII RILKLFQSLS RVEPRMKKKI LPTILDLILR TQASSLIYEC INCIVNGNML
SADSSKDKET AKICIKQIME FFKTKDSNLK FVGLIALISI LKIFPVFMHK VDGVSTIIMD
CLTDPDLIIK RKALEICHYL VQEDNIAEVV KVLLLQLIPS DTNAIPEALK QEVTLKILSI
TSNDKYANVP NFKWYVAVLK DIINLTLLPL PSSSNASTIS PATANVIAAE IGKEFKELAT
KVPSIRPTIL NKVIVEAVQD VRILDVCPSL LRDFYWIMGE YIDELRSPSE EEMFIQAIVK
LYNGIVTDYL VHYSVQGKFK REQFNQLAHY LYKLINFLGN WENHRNYEVQ ERALSWLEFL
KLSLEAMTHE DISAIQKLEK DENSLPMLLT HILPSFFKSY PLNPIAKNSQ KKIPIPEDLN
LDEPIYTIPF DVSADDVDSF VNDEYDLFIE DEVDLHAEEA SLISLSNRGS DDDLKKKQER
LEKLRDDPYY LGSKKSSKKK SINRRVLLVD EDKTPSPENF SEKGSINSGV APVKERKKKP
LKMKKDKVVI LSEETIEGGP DEEEDEEATA VKAKSKKKKS NFMIDSSNLD NFDLTSSAMS
ESVSGLDKDY EYNIDLDELR KKLASSSLKD KEKKEKKEKK KKKKKSSASN VEKIK
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