Gene PICST_44614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44614 
SymbolOYE2.6 
ID4839055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp497640 
End bp498863 
Gene Length1224 bp 
Protein Length407 aa 
Translation table12 
GC content43% 
IMG OID640390370 
ProductNADPH dehydrogenase 
Protein accessionXP_001384055 
Protein GI126135062 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCAG TCAAAATTTC TCCATTGAAG GATTCTGAAG CATTCCAGTC TATCAAAGTT 
GGTAACAACA CTCTTCAAAC CAAGATTGTC TATCCACCAA CTACTAGATT TAGAGCTTTA
GAAGACCACA CTCCTTCTGA TTTGCAATTG CAGTACTATG GCGACAGATC CACTTTCCCA
GGTACTTTGC TTATCACTGA AGCTACTTTT GTCTCTCCTC AAGCCTCTGG TTATGAAGGT
GCTGCTCCAG GTATTTGGAC TGACAAGCAC GCTAAAGCAT GGAAGGTTAT TACTGATAAA
GTTCATGCCA ACGGTTCTTT CGTTTCAACC CAGTTGATTT TTTTGGGAAG GGTTGCAGAT
CCAGCTGTTA TGAAGACCCG TGGGTTGAAT CCAGTTTCTG CCTCTGCTAC TTATGAAAGT
GATGCCGCTA AAGAAGCTGC CGAAGCAGTT GGTAACCCTG TTAGAGCTTT GACTACCCAA
GAAGTCAAGG ATCTTGTTTA CGAGACTTAC ACCAACGCTG CTCAGAAGGC CATGGATGCT
GGTTTCGACT ATATTGAACT CCATGCTGCT CACGGCTACC TTTTAGATCA ATTTTTGCAA
CCATGCACCA ATCAAAGAAC TGATGAATAC GGTGGATCCA TTGAGAACAG AGCCAGGTTA
ATTCTTGAGT TGATTGACCA TTTGTCTACC ATTGTCGGTG CTGACAAGAT TGGTATCAGA
ATCTCTCCAT GGGCTACTTT CCAAAACATG AAGGCTCACA AGGACACTGT TCACCCATTG
ACTACTTTCT CTTACTTGGT CCACGAATTG CAACAGAGAG CTGACAAGGG TCAAGGTATT
GCCTACATTT CTGTCGTTGA GCCTCGTGTA AGTGGTAACG TCGACGTCTC TGAAGAAGAC
CAAGCTGGTG ACAACGAATT TGTCTCCAAG ATCTGGAAGG GTGTTATCTT GAAGGCAGGT
AACTACTCCT ACGATGCTCC AGAGTTCAAG ACATTGAAGG AAGATATCGC TGACAAGCGT
ACATTAGTTG GCTTCTCCAG ATACTTCACC TCGAATCCTA ACTTGGTTTG GAAATTGCGT
GATGGAATTG ACTTGGTGCC ATATGACAGA AACACGTTCT ACAGTGACAA TAACTATGGT
TACAATACCT TTTCTATGGA TTCCGAAGAG GTTGATAAAG AATTAGAAAT CAAGAGAGTT
CCTTCGGCCA TTGAAGCTTT GTGA
 
Protein sequence
MSSVKISPLK DSEAFQSIKV GNNTLQTKIV YPPTTRFRAL EDHTPSDLQL QYYGDRSTFP 
GTLLITEATF VSPQASGYEG AAPGIWTDKH AKAWKVITDK VHANGSFVST QLIFLGRVAD
PAVMKTRGLN PVSASATYES DAAKEAAEAV GNPVRALTTQ EVKDLVYETY TNAAQKAMDA
GFDYIELHAA HGYLLDQFLQ PCTNQRTDEY GGSIENRARL ILELIDHLST IVGADKIGIR
ISPWATFQNM KAHKDTVHPL TTFSYLVHEL QQRADKGQGI AYISVVEPRV SGNVDVSEED
QAGDNEFVSK IWKGVILKAG NYSYDAPEFK TLKEDIADKR TLVGFSRYFT SNPNLVWKLR
DGIDLVPYDR NTFYSDNNYG YNTFSMDSEE VDKELEIKRV PSAIEAL