Gene PICST_44613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44613 
SymbolOYE2.7 
ID4838977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp840449 
End bp841669 
Gene Length1221 bp 
Protein Length406 aa 
Translation table12 
GC content42% 
IMG OID640390292 
ProductNADPH dehydrogenase 
Protein accessionXP_001384116 
Protein GI126135184 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCG TTAAAATTTC TCCATTGAAG GATTCTGAAG CATTCCAATC TATCAAAGTT 
GGTAACAACA CTCTTCAAAC CAAGATTGTC TATCCCCCAA CTACTAGATT CAGAGCTTTG
GAAGACCACA CTCCTTCTGA TTTACAATTG CAGTACTATG GTGACAGATC CACTTTCCAA
GGTACTTTGC TTATCACTGA AGGTACTTTT GTCTCTCCTC AGGCTTCAGG TTACGAAGGT
GCACCAGGCA TTTGGACTGA TAAGCATGCC AAAGCATGGA AGGTTATTAC TGACAAGGTT
CATGCCAACG GATCATTCAT TTCAACGCAG TTGTGGTTTT TGGGAAGAGT TGCAGATCCA
GCTGTTATGA AGACTCGTGG GTTGAATCCA GTTTCAGCGT CTGCTACTTA TGAAAGTGAT
GCCGCTAAAG AAGCTGCTGA ATCTGTCAGT AACCCAGTTA GAGCTTTGAC TACTCAAGAA
ATCAAGGATC TTGTCTACAA GACTTACGCT AATGCTGCTC AGAAGGCCAT GGATGCTGGT
TTTGACTACA TTGAATTCCA TGCTGCTCAC GGTTTCCTCT TAGATCAATT TTTGCAACCA
TGCACTAATC AAAGAACTGA TGAATACGGA GGATCTATTG AGAATAGAGC CAGATTCGTT
CTTGAGTTGA TTGACCACTT GTCTACCATT GTTGGAGCTG ACAAGATTGG TATCAGAATC
TCTCCATGGG CTACTTACCA TAACATGAAG GCTCACAAGG ACGCAGTTCA CCCATTGACT
ACTTTCTCGT ACTTGGTTCA CGAATTGCAA CAGAGGGCCG ACAAGGGTCT AGGTATTGCT
TACATTTCTG TCGTTGAGCC TCGTGTCAGT GGTCTCGATA ACGTTGATAA AGAAGATCAA
GCTGGTGACA ACGAATTTAT TGGCAAGATT TGGAAAGGTG TTCTCTTAAA GGCCGGTAAC
TACTCGTACG ACGCTCCAAC ATTTACCACT TTGAAGGAAG ACATTGCTGA CAAGCGTACA
TTAGTTGGCT TCTCCAGATA TTTTACCTCG AATCCCAACT TGGTTTGGAA ATTACGTGAT
GGAATTGACT TGGTGCCATA CGACAGGAAC ACGTTCTACA GTGACAATAA CTATGGTTAC
AATACCTTTT CTATGGCTCC TGAAGAGGTT GATAAAGAAA TAGAAATCAA GAGACTTGCT
TTAGCCATTG AAACTTTGTG A
 
Protein sequence
MSSVKISPLK DSEAFQSIKV GNNTLQTKIV YPPTTRFRAL EDHTPSDLQL QYYGDRSTFQ 
GTLLITEGTF VSPQASGYEG APGIWTDKHA KAWKVITDKV HANGSFISTQ LWFLGRVADP
AVMKTRGLNP VSASATYESD AAKEAAESVS NPVRALTTQE IKDLVYKTYA NAAQKAMDAG
FDYIEFHAAH GFLLDQFLQP CTNQRTDEYG GSIENRARFV LELIDHLSTI VGADKIGIRI
SPWATYHNMK AHKDAVHPLT TFSYLVHELQ QRADKGLGIA YISVVEPRVS GLDNVDKEDQ
AGDNEFIGKI WKGVLLKAGN YSYDAPTFTT LKEDIADKRT LVGFSRYFTS NPNLVWKLRD
GIDLVPYDRN TFYSDNNYGY NTFSMAPEEV DKEIEIKRLA LAIETL