| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_44269 |
|---|
| Symbol | |
|---|
| ID | 4837973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | - |
|---|
| Start bp | 434814 |
|---|
| End bp | 435557 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640389288 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383715 |
|---|
| Protein GI | 126134381 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.743811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGTT CCTCTTTTAA AACTCTTTCA GCCAAAGCTG CAGCTCAACT CGACCAGGAA
TTGATGTCGA CTGGAGCCTT TTCTATCGAT CAACTCATGG AATTGGCAGG ACTTTCAGTA
GCCCAAGCCA TATATAAACA ATATCCACCT CCCACAGCTT CAAAGGTATC GCGTGTATTG
GTTCTTGTTG GTCCGGGAAA CAACGGAGGC GATGGCTTGG TGGCTGCTCG CCATTTAAAG
CTCTGGGGAG GATACGACCC CGTCTTGTAC TATCCAAAAA GGACAAAAAA TCCTCTTTAT
GCTAATTTGG TAACTCAATT GCAAGACTTA GATGTAGGAG AAGTCGAGAC TTTGGATGAA
GTCAAACAAT TGGCTTTGGA AGAATCAACG GGCCTAATCA TAGACTCGTT GTTTGGATTC
TCGTTCAAGC CTCCCGTAAG AGAACCCTTC AAAGACTTAA TATCCTTTCT TTCAGAAAAT
CACGGAAAGA TATCTCCCAT AGTTTCTGTA GATATTCCAT CAGGTTGGGA CGTAGACGAA
GGTCCAATAG ATCTTGATAT CAAGGCTACA ATGTTGGTGA GTCTCACAGC TCCAAAACCA
TGTGCTAAGA AGTTTGTGTC CTATGGTTCT GACAAGATTC ACTATCTTGG TGGACGGTTC
ATTAACGGAA AGATCGCTGC CAAATACGAC ATCCAAGACT TGATTGCAAA ATACAAGGAT
AATGACTTAA TAGTGAAGCT ATAA
|
|---|
| Protein sequence | MLRSSFKTLS AKAAAQLDQE LMSTGAFSID QLMELAGLSV AQAIYKQYPP PTASKVSRVL
VLVGPGNNGG DGLVAARHLK LWGGYDPVLY YPKRTKNPLY ANLVTQLQDL DVGEVETLDE
VKQLALEEST GLIIDSLFGF SFKPPVREPF KDLISFLSEN HGKISPIVSV DIPSGWDVDE
GPIDLDIKAT MLVSLTAPKP CAKKFVSYGS DKIHYLGGRF INGKIAAKYD IQDLIAKYKD
NDLIVKL
|
|---|
| |