Gene PICST_44196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44196 
SymbolBEM2 
ID4838238 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1531174 
End bp1536639 
Gene Length5466 bp 
Protein Length1747 aa 
Translation table12 
GC content38% 
IMG OID640389553 
Productbud-emergence protein 
Protein accessionXP_001383582 
Protein GI150864657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.597573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAACTGTAC AGCAATTGGT TCGTCCTGAT TATGATTCGC GTGTTATTAA GAATGGATGG 
CTTAATGGAC TTATGAACCC GAATTCGGCA CCCGAAATCT CGGACCAGAC GCTAAAGTTA
GTCAGAGCAG AGTTGAAAGG CTCCCATTTG TACTTATACA AACCTCCATT ATCGCTCAAC
ATCAAGAACT TCAAGCTTGA CAACTCCGGC TCGACATCGA ACGATCCAAA CGACGAATCC
TTTTACCCAA CTCCAACTCC TACCGAATTA CACGGAAACG CTTCCACCCC TTCACTTTCA
GCCCATGAAG GATTGTACAA TTCAAACAGC TCCAACAATT CCAACATTCA CGAAATTGGC
TCACCTGTTC TTTTGTCATC TTCGAACTCT CAAACAACTC CAACAATTGT CCAGTCACAG
TCTATGGGTT CTGCTTTCAC AACACCCAAT CCCAACACGA CTCTACTTGA CACACCTCCT
TTGAACCAGC CTTCAACCTC CGTTATCGAT CCCGACGACT TCGTGATCAC GTACTACAGC
ACGAAATTGC CTCATCCCGA CTTAAACTTC GATTTTAAGA ACCACCAATT CATCACTTCC
ACTGCTTCGT TCTGCCAATC TTGTGGAGTC ACACCTTCCA CCACGCCTAA TTCTATAGAG
TCCTTGATCC ACTTCATCTT GTTCAACGAA GACGAAGTCG ATAATGCGCA AATTTTGGAT
CTTATTAATA TTTTGCCCAT ATTCCCCAAC TTTGGTAGAA TCTTGAAGTT GATCGCAATC
TTCCTTTCAG ACATCTACAA TCACAAGTTC AAAGGCTACT ACAACCAGGC CGTCGTGATA
GAGCGAGTGC TCAAAATCTT ATATAATGTT GAAGAGAACT TCGACGGCTT CTTGCTAAAG
TCTGACATTG CACCCTACAT CTTGAGAATC TTGGAGACGT TGTCAGAGCC GGAATCGCCC
GAAACCGAAA TTACAAACAT ACAGAAGTTC AAGAAGGACA TGTTGAACAA ACAACAATCG
TTGGTCAACC TTGTCAACAA CGACCATGTT CCCTCTGATG TGAACCCATT TCAAGATTTG
AATTCCATTG TGTTCATGAA AGATATCAAC TTGGTTGATT TCGTTCAAGC CATTAGTGCC
ATTGATTTGA AGTTCTTCAA ACATTGGAAT TCCAACATCG ACAAGTCGCT CTTGTTGTAT
TCGTCCATCA ATGGCAATTT CGACTCATCT AGTAGTCACG GCACCGCGGA CTACTTCTAC
AAGAAGAATC CTCTCATTTT CAACAATGAC CATCATATCC ACTACTTATC GCGTCTATTG
ATCAACCATA TATTTGTGGA AAGCTCGTCG TCGACCTTAA GTTCTTCTAG TTTGGAACGC
AAAGCAAGAT TGTTGGAGAA ATGGATCGAC TTGGGTTGTC TTTTAGACAA GTCAGGAAAC
ATGTCGTCGT GGTTGGGTAT TTCATCTATC ATATTATCAC AACCAGTACT TCGTTTGACA
AAAATTTGGT CATTGGTTTC GCCTAACTAT ATAAAGTTGT TGAAGAGTGA TTGGTCACCA
GTGTTGTTCG AATTGGATAG AAGACACTTG GCTAACGGTA CAAGTTACGA GAAGTTGCAT
AGCTCACCAT CTGCCTCTCC AGACAAGGAC GACTTGCGTG ATTCTATCAA TTTCAAGGAC
TCGTACCATA TTATGGCTCC AAGAGGGTTG GGTAAGATTT ATCCGAAAGA GCGCGTCATT
CCCTACTTTG GAGATTTAGT CATCAACAAC AACTCAACAG CAGACATCTT TGAGTTGGAG
TCGATTTGGA AGAGAATCAA TTATTCATTC AGCAGATGGA ACGAGTACCT CTCCAACTTG
ACCAACTATT ATGAGATTAT TAAATACAAC GACGATGTTC TCAGAAGATA CGATAGCATG
GGTTTCATTT TCTCCAATGA AAGTTTGAAC CAGGTCTTAT ACTTGGGTGC CAATGAAGAT
GGTAAACCAT TGCCTAGTCA GAATGAAGAG ATAAGACCCC AATTGAAGAG AACCAACTCT
ACCGACTTGC AACAAAAGTT GTTAAAGTTG ATTGAAATTA ATTGTGACTC GATCAATTTG
GAGAAGATAA TGAGGTTATC CATTAATTTA GAGCCAGATT TGCCAGAGTC ATATTTGAAG
GTGGAAATGT CGACGTCAGT GATTCCAAAC ACTCCCTTGG AATTGAGCTT CATGAGAAAC
CGTAATATGT CTAATCTTTC GATTCATTCA AATGGATCAA ATTCTTCACT TAATGGAGAC
CTGTCTACGA TTTACGAGAC AGTAACAGGC AAGAGCGGAA TTGAATACAA TCCCGAATCA
CGTATTCCAA GTTTCAACGA TCGTTATTTC ACCATTAACT TGTCCAAGTA TGATGAATTG
ACAGCATACA GCAACAATGA AGATAGTTCC CATAACCAGA AGCTTTTGGA TCCGTCTGTT
AGCAAGCACA ATTTCATTAT CAATGATGAC TTGACTTTCA GAATCGATGA TTTCGTTAAT
GAATTAGATC CTACAGCTGT TAATTTCAAT AGCATTGATG ATGTCATCGT TGAAGTCGAA
GATGATGTTC CTGGATTGGG AATCGATGTA GATGATATCT TGAATTCAGA AAAGTTCAAC
AACTTCACAA TATCACCAAA ATTGGGTTCT GGAAACACCA AGAAATTTGG TGGTATTAGC
GGTGATTCTC TCAATGGAGC TTCCAATCAT TCGAAAGACC TCCCCATCAG ATTTATTCCA
AAATATGCAA CTATGGATAA GCTCATTGAC TTGTTGTTGA TTGATGTTAA GTATTTCCAT
CAAGAAATTA CCCTTGACTT AACAGAATAT CGATTTGTAT TCTTGTTGAA TTATAACTCA
TTCATTACAA CCAAAGAACT CTTGGATAAG TTGGCTTTGA GATTTATCAA TTCTGGTAAT
GCTGTTATTT CGGTTATGAA AAGAGAATAC TTGAAGAGGA CAGGAGTTCG TTCTCCACGG
GTTGACTTCC CCAATTGGAG TCTAGACACC ACTGTTGATT TGAATGAACT TGGTGACGTT
GATTATGAGC TCTTGTTGAA AATACAGATC AATATTTTAA AGGTTTTGAT TGTCTTAGTC
AATAATTTTT ACTCCAATTT CTCGCTTGAC ATGGGCAATA AGAAAATCTT GATAAAGTTG
CTTAAATTAT TCAGCAATGA AATTTTACAA TGGTATAATT CTAACAAGAT TGACTCGAAA
TTAGAAAAGT CGTTTGAAAG CTTGGTCAAC TATTACAAGA AATTGAAGAA GTTGTTCGTG
AAGAAGACCT ATAGACCAAT TGAAATTCTG AAATTTGACG AGTACTTGAT CAAGGAATTT
AAGTTCAACA ACTCATTACA TGAAGTTCCA ATGAATAGAA ACTTACCAAG CCATAGAAAT
GTGAGCAAAA TCGAGAAGTT CTTACTCAAA TTCAACAAGC TTTTGACTGT CTTCTACAAG
GGAATCAAGG CAGAGGATTG GGTGAGAGTG TACAAGATTA TCGAAACAGT TTTCGAAGAA
AATAATTTGT TTGAATTCAA CTTGCAGAAA TCAACCGTTA GCGAAGATTA CATGATTGTT
TCCAATGTTT TCAACTACTT CGAATCTTTG GTTGATCCAG TCGAAAGACA ATTGATATTG
AAGAGATTTC CTTTAGTTTT CAGAAAGTTA TTCAAATTGT ACTTTAAGTT CAGATCTTAC
ATTCTTATCC AACTAACTGA TTTAGGAATC ACTGTTGAAG AAAGATTGGA TCGTATGAAG
ACATTGTTGA TTATGTGTAA GATCTCGAAG TTGAAAATGA GTGACAACCA GTTTGTTTTT
GAAGGAGGCA GAGGTAACAT CCCATCTTGT ATCGAGACTG CTATTACAAA TGTAATCTAC
TCTCCTGAGA GTAGACTTTT CGCCAGTTTG TGGATCAAGG CATCAGTTCA GTTAAATGAT
GATGTCCCCG CAAGTTCAAC TTCAGTATAT GAAGATCTTG ACATGTTATT GCCACACAAG
TTGACTTCTT CTGATTTGCA AAGCGGTGAG CCATTGTTGC CTTGTTTTGG TTGGATTATT
GAAAATATCA TTGAAACCAA TAAGTGCCCA AGTTTCTTCA AGAACGCAAT CAATTTTAAT
AAGAGATACT TAATCTTCAA GCTCATTAAG GAGCTTGGTG TTGAAGATAT TGATGGAACT
GGCGAAGGAG CCAATTTCAG TTCTCATGAT TCACGAGAGT TTGATTTCTT ATTGAAGTTG
GATGAGTCAC TTGTGGACAC ACAAAGCATC AGAGAATTTA CACACCATGA CAAAGAAAGA
GGCAAATTAT TTAAAAGTGT GTTGAACGAA CAACAACGTC TATTGGTCGA TGATAATATG
AAGAAGCAAC TTCGTGAAAG CAAGACAAGC TCTGGAGCCG GAAATCTGGC AGCTGCAAGC
AACTCATTGA CACTTCAGAA AAAGACTTCT AATTCTAGTC TAAAGCGTCA ATCGTTGTCT
TATAAATCTA ATTCATCATC CAGGTTCAAG ATCAGTGGTC TATTTGGAAA ATCACGTCCC
TTCTCACTCA ATGGATATTC TAATACGGAA AGACGTGTTA GTTCTCAAGA ATTGCCAAAC
ATTGAAAGTA TATTAGATAC CAAGCAAAAA CCATTTGCAA TCATTGCATT GAAGAGCAAG
AAGATTTTCC CAGTTTACTT ATTGCCATTA TGTTTCAAGG TGGATTCAGA TGTGGCAGGT
GATGATGTTT TCTTTCAGGC TCCAAATCAA GCTGATTTGA ACGATTGGTT GGTCAAATTG
AACTATGCCA ACAGACACTG GTTCTTCTCT AGAAATCTTA ACTTGAAGAA CAATCATCCA
ATGACAACAT TTGGTATTCC TATTACAGTT GTCTGTGCTC GTGAACAAAG CACTTACCCT
ACGTTCTTGG AGTTGATCTT TGATGAAATT GAAAGCGAAG GATTGAAAGA TGTCGGTATC
TATAGAATCA GTACTTCGAT CAGTGAATTG GCAAATGTTA AGGCTATTAT TGATAGAACT
GGTACTCTCA ATGTCAACGA AAAGCCGTAT GATACTCACA CATTGACTAG TATTGTCAAG
TCATATTTCA GAGAGTTGCC AGATGCCTTG TTATCGGACA AGGTCATTAA TTCCTTCTTT
TCCTTGAACA GACTCTCGGA AGAGATTGAT GACGAAGTGG ACGATCCAAG AACTCTAGAC
AAGTACAAGG AAGTCTTGAA GGAGTTGCCA TCGGTTAACT ACAACACCTT GAAGTTACTT
TTGAAGCATT TGCAAAAGGT TAGTCATTTC AGTGAAGATA ACAAGATGAC GACCTCTAAT
TTAGCCACTG TTATAGGCCC TGCTTTGACT GAAGCAAGCA ATTTAGAAAT CTTGATCAAC
AACTTTGGAT TCATGAATTC GATCTTGGAG AAGTTAATCA TCAATTACGA CTACGTGTTT
GATGAT
 
Protein sequence
KTVQQLVRPD YDSRVIKNGW LNGLMNPNSA PEISDQTLKL VRAELKGSHL YLYKPPLSLN 
IKNFKLDNSG STSNDPNDES FYPTPTPTEL HGNASTPSLS AHEGFTKLPH PDLNFDFKNH
QFITSTASFC QSCGVTPSTT PNSIESLIHF ILFNEDEVDN AQILDLINIL PIFPNFGRIL
KLIAIFLSDI YNHKFKGYYN QAVVIERVLK ILYNVEENFD GFLLKSDIAP YILRILETLS
EPESPETEIT NIQKFKKDML NKQQSLVNLV NNDHVPSDVN PFQDLNSIVF MKDINLVDFV
QAISAIDLKF FKHWNSNIDK SLLLYSSING NFDSSSSHGT ADYFYKKNPL IFNNDHHIHY
LSRLLINHIF VESSSSTLSS SSLERKARLL EKWIDLGCLL DKSGNMSSWL GISSIILSQP
VLRLTKIWSL VSPNYIKLLK SDWSPVLFEL DRRHLANGTS YEKLHSSPSA SPDKDDLRDS
INFKDSYHIM APRGLGKIYP KERVIPYFGD LVINNNSTAD IFELESIWKR INYSFSRWNE
YLSNLTNYYE IIKYNDDVLR RYDSMGFIFS NESLNQVLYL GANEDGKPLP SQNEEIRPQL
KRTNSTDLQQ KLLKLIEINC DSINLEKIMR LSINLEPDLP ESYLKVEMST SVIPNTPLEL
SFMRNRNMSN LSIHSNGSNS SLNGDSSTIY ETVTGKSGIE YNPESRIPSF NDRYFTINLS
KYDELTAYSN NEDSSHNQKL LDPSVSKHNF IINDDLTFRI DDFVNELDPT AVNFNSIDDV
IVEVEDDVPG LGIDVDDILN SEKFNNFTIS PKLGSGNTKK FGGISGDSLN GASNHSKDLP
IRFIPKYATM DKLIDLLLID VKYFHQEITL DLTEYRFVFL LNYNSFITTK ELLDKLALRF
INSGNAVISV MKREYLKRTG VRSPRVDFPN WSLDTTVDLN ELGDVDYELL LKIQINILKV
LIVLVNNFYS NFSLDMGNKK ILIKLLKLFS NEILQWYNSN KIDSKLEKSF ESLVNYYKKL
KKLFVKKTYR PIEISKFDEY LIKEFKFNNS LHEVPMNRNL PSHRNVSKIE KFLLKFNKLL
TVFYKGIKAE DWVRVYKIIE TVFEENNLFE FNLQKSTVSE DYMIVSNVFN YFESLVDPVE
RQLILKRFPL VFRKLFKLYF KFRSYILIQL TDLGITVEER LDRMKTLLIM CKISKLKMSD
NQFVFEGGRG NIPSCIETAI TNVIYSPESR LFASLWIKAS VQLNDDVPAS STSVYEDLDM
LLPHKLTSSD LQSGEPLLPC FGWIIENIIE TNKCPSFFKN AINFNKRYLI FKLIKELGVE
DIDGTGEGAN FSSHDSREFD FLLKLDESLV DTQSIREFTH HDKERGKLFK SVLNEQQRLL
VDDNMKKQLR ESKTSSGAGN SAAASNSLTL QKKTSNSSLK RQSLSYKSNS SSRFKISGLF
GKSRPFSLNG YSNTERRVSS QELPNIESIL DTKQKPFAII ALKSKKIFPV YLLPLCFKVD
SDVAGDDVFF QAPNQADLND WLVKLNYANR HWFFSRNLNL KNNHPMTTFG IPITVVCARE
QSTYPTFLEL IFDEIESEGL KDVGIYRIST SISELANVKA IIDRTGTLNV NEKPYDTHTL
TSIVKSYFRE LPDALLSDKV INSFFSLNRL SEEIDDEVDD PRTLDKYKEV LKELPSVNYN
TLKLLLKHLQ KVSHFSEDNK MTTSNLATVI GPALTEASNL EILINNFGFM NSILEKLIIN
YDYVFDD