Gene PICST_44073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44073 
Symbol 
ID4838171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp57137 
End bp58168 
Gene Length1032 bp 
Protein Length343 aa 
Translation table12 
GC content42% 
IMG OID640389486 
Productpredicted protein 
Protein accessionXP_001383290 
Protein GI150864465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.444836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTGC AAACGTACGA AAAGCTGCCA TCTACAACTA TATACCATAA GCTTCCTCTA 
AAGATCAACA ATGACAGGGC CCGTGACACT CTGTCGATTC TCGTAATGAT CCCCGGAAAT
CCAGGTTTGA TCGAGTTCTA CACCACGTAT CTCGATTTGA TCCAGACTGA GTTTCCAGCA
CTCGAAGTGC TTTGTATTAG TCATGCTGGT TTTCAAACTT CAGAACCTGT AAACAGCGAG
AAATTCAAAT TCTACGATTT GGAGTATCAA ATCAAGCACA AGTTTGACAT TATCTCGGAG
TTTATTGCCC AGAAACTAGA CGACGGCTAC AACAATGTCG AACTTTACTT TCTTTCCCAT
TCTGTAGGCT CGTATGTGCA TCAGCGAGTC ATCCGCATGT TGCTACAGGA AAAAGAATTG
CACGGCAAGT TCTCCATTAA GTTCACCGGA CTCATATGTC CTACCATTGT GGATATTGCA
CAGTCTGACA ACGGCCAATT TTTCACAAAG TTGTTTTCTT TGTTGCCGAT CATTTCCATA
TCACTTTGGG TTGCATGGTT GCTCAACACT ATTTTGCCTG AAGCTATGGC TAAGTCCATA
ATTGCCAAAA GATTTGTTGA GAAACCTAAG TCCAATGATA CTGACTCTGT AGAAAGTTGG
CAAAATTCAG TTACTGGGGC ATACAAACTC TACAGTTCAC AACGGCTCAT CGAGCAGGCT
TTGAATTTGG CCCGGCAGGA GATGCTTGTG ATTACGAGAG ATGACATCAT CAATGACTGG
TTTTTCCAAC AACTTTCGGA GATCAAAATA TGGACATTCT TCGCCGAGAA AGATCACTGG
GTGCACAACA GCTCCAGAGA CTACACCTTA CGAAAGTACC ATGATTTAAC TAACAATAAC
TTGTTGTTTG AGGTGGGTTC GTCGGAGGAT GCGATTACTC ATAGCTTCTG TGTTAACCAA
AGTGTAGAGT TTTCCAAATT GACCATTAAG GCTATACGGT CTCTAGACTT GGACATTGCC
TACGAAAACT GA
 
Protein sequence
MAVQTYEKSP STTIYHKLPL KINNDRARDT SSILVMIPGN PGLIEFYTTY LDLIQTEFPA 
LEVLCISHAG FQTSEPVNSE KFKFYDLEYQ IKHKFDIISE FIAQKLDDGY NNVELYFLSH
SVGSYVHQRV IRMLLQEKEL HGKFSIKFTG LICPTIVDIA QSDNGQFFTK LFSLLPIISI
SLWVAWLLNT ILPEAMAKSI IAKRFVEKPK SNDTDSVESW QNSVTGAYKL YSSQRLIEQA
LNLARQEMLV ITRDDIINDW FFQQLSEIKI WTFFAEKDHW VHNSSRDYTL RKYHDLTNNN
LLFEVGSSED AITHSFCVNQ SVEFSKLTIK AIRSLDLDIA YEN