Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_44073 |
Symbol | |
ID | 4838171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 57137 |
End bp | 58168 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389486 |
Product | predicted protein |
Protein accession | XP_001383290 |
Protein GI | 150864465 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.444836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTGC AAACGTACGA AAAGCTGCCA TCTACAACTA TATACCATAA GCTTCCTCTA AAGATCAACA ATGACAGGGC CCGTGACACT CTGTCGATTC TCGTAATGAT CCCCGGAAAT CCAGGTTTGA TCGAGTTCTA CACCACGTAT CTCGATTTGA TCCAGACTGA GTTTCCAGCA CTCGAAGTGC TTTGTATTAG TCATGCTGGT TTTCAAACTT CAGAACCTGT AAACAGCGAG AAATTCAAAT TCTACGATTT GGAGTATCAA ATCAAGCACA AGTTTGACAT TATCTCGGAG TTTATTGCCC AGAAACTAGA CGACGGCTAC AACAATGTCG AACTTTACTT TCTTTCCCAT TCTGTAGGCT CGTATGTGCA TCAGCGAGTC ATCCGCATGT TGCTACAGGA AAAAGAATTG CACGGCAAGT TCTCCATTAA GTTCACCGGA CTCATATGTC CTACCATTGT GGATATTGCA CAGTCTGACA ACGGCCAATT TTTCACAAAG TTGTTTTCTT TGTTGCCGAT CATTTCCATA TCACTTTGGG TTGCATGGTT GCTCAACACT ATTTTGCCTG AAGCTATGGC TAAGTCCATA ATTGCCAAAA GATTTGTTGA GAAACCTAAG TCCAATGATA CTGACTCTGT AGAAAGTTGG CAAAATTCAG TTACTGGGGC ATACAAACTC TACAGTTCAC AACGGCTCAT CGAGCAGGCT TTGAATTTGG CCCGGCAGGA GATGCTTGTG ATTACGAGAG ATGACATCAT CAATGACTGG TTTTTCCAAC AACTTTCGGA GATCAAAATA TGGACATTCT TCGCCGAGAA AGATCACTGG GTGCACAACA GCTCCAGAGA CTACACCTTA CGAAAGTACC ATGATTTAAC TAACAATAAC TTGTTGTTTG AGGTGGGTTC GTCGGAGGAT GCGATTACTC ATAGCTTCTG TGTTAACCAA AGTGTAGAGT TTTCCAAATT GACCATTAAG GCTATACGGT CTCTAGACTT GGACATTGCC TACGAAAACT GA
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Protein sequence | MAVQTYEKSP STTIYHKLPL KINNDRARDT SSILVMIPGN PGLIEFYTTY LDLIQTEFPA LEVLCISHAG FQTSEPVNSE KFKFYDLEYQ IKHKFDIISE FIAQKLDDGY NNVELYFLSH SVGSYVHQRV IRMLLQEKEL HGKFSIKFTG LICPTIVDIA QSDNGQFFTK LFSLLPIISI SLWVAWLLNT ILPEAMAKSI IAKRFVEKPK SNDTDSVESW QNSVTGAYKL YSSQRLIEQA LNLARQEMLV ITRDDIINDW FFQQLSEIKI WTFFAEKDHW VHNSSRDYTL RKYHDLTNNN LLFEVGSSED AITHSFCVNQ SVEFSKLTIK AIRSLDLDIA YEN
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