| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43247 |
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| Symbol | SMI1.1 |
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| ID | 4838314 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 1133913 |
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| End bp | 1135196 |
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| Gene Length | 1284 bp |
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| Protein Length | 412 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389629 |
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| Product | protein involved in (1,3)-beta-glucan synthesis |
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| Protein accession | XP_001383501 |
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| Protein GI | 150864608 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4282] Protein involved in beta-1,3-glucan synthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTGC GACAAAAGTT TCAGGAATTC ATCTATTCCA TCAGCACCAG TGACAAGTAT
TCGGAGTTTG ACTCAAGAAA GTCGTTCAAC AGAGTCAACA AACCGGGCCC AGAATCAACC
CTCTTGTATT CTCACCACAA CCAATCGAGT CATGAACTAA TCACAGAAAA CGATCTTGAT
GACGGCAATC TCAACAAACA CAATCTTGAT GGAGTCCACG AAGTCAAACT TGCCTGGAGA
CACATCAAGA ACTGGATGGA CAAGTACTCG CCGGACTTGG GTCATTCTCT CCAGGATAAA
TGTACCAATA GCGATCTTAA CGACTTCCAG AAGGACTTGA ATATCAAGTT GCCCAATTGT
GTTTTAGAAT TTTACAAATT GACCGATGGT CAGTCCGACT TTGGCAACAA CACCAACGAA
ATCAACGGTC TCATATTCGG TCTTAAGCTC ATGCCATTGG ATGAGATTAT GGTTCTGACT
GAAAACTGGA GAAAGGTAGC AAGGGTCTTG AACTCAGAGT TGTCTCAAAT TAAGCAAGCC
AACAAGATCA GCGAGTTGTC GAAATTGCCT ACAATTCACA GCAATCAAAA TGCCTACAAG
AAGAAGTTGA GTGGAAGTGG CGGCAGCGAA ACTTCTTCAA CTAAGACGTC TTTTGATTTA
GTAGACTCTT TCTCTAGATC GACTCGTTCT TCATCTGTAT CCAGTGAATT ATCTTCTGGT
TCAAACTCTC AATTAAACAT TCCAAAACAG AGATGCATCC CTCCCGGGGC CACCCATGAG
ACATTTGCTC ATCCTATGTG GATTCCCTTA GCAACCGATG AGGTAGGCAA CTATGTGGGA
ATCGACTTGT CACCCGGTGC TACTGGTAAA TGGGGACAAG TGATCTTGTT TGGTAGAGAT
TTCGACTTCA AGTTCAGAAT AGCCGACAAC TTTGGCGATT TCTTGTTGAT CTTTGCCAAC
GACTTGGAAA TTGGCAACTG GGAGCTTAAA CGAGACCGGA AAAACAACTA TGGAGACTTG
TTTATTGGCA ATGAGGGTGA ATTGGTATAC GTAGATAAAA CCACCAAGTT GGAAATACCG
TACTTGGAAG TTTTGAGAAG ACGGGCTATT GAGAAATGGC TCTCTTCGTT AGAGATTTCA
GAGAACCTTA CACCTGAGCT TGAGCAGTTA AAGCAAGACT TGACTGCTAA GGATCAAACT
TTGACATCGT TCAATAAGAG CTTAAACAAT ATCGATAAGT TCATCAACAA TAATCTTTCT
ACCATAGACA ACCTTGACGA GCCA
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| Protein sequence | MSLRQKFQEF IYSISTSDKY SEFDSRKSFN RVNKPGPEST LLYSHHNQSS HELITENDLD
DGNLNKHNLD GVHEVKLAWR HIKNWMDKYS PDLGHSLQDK CTNSDLNDFQ KDLNIKLPNC
VLEFYKLTDG QSDFGNNTNE INGLIFGLKL MPLDEIMVST ENWRKVARVL NSELSQIKQA
NKISELSKLP TIHSNQNAYK KKLSGNSFSR STRSSSVSSE LSSGSNSQLN IPKQRCIPPG
ATHETFAHPM WIPLATDEVG NYVGIDLSPG ATGKWGQVIL FGRDFDFKFR IADNFGDFLL
IFANDLEIGN WELKRDRKNN YGDLFIGNEG ELVYVDKTTK LEIPYLEVLR RRAIEKWLSS
LEISENLTPE LEQLKQDLTA KDQTLTSFNK SLNNIDKFIN NNLSTIDNLD EP
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