| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43167 |
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| Symbol | TNA1 |
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| ID | 4837732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 58779 |
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| End bp | 60167 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389047 |
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| Product | high affinity nicotinic acid plasma membrane permease |
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| Protein accession | XP_001383291 |
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| Protein GI | 150864466 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.460781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTGA AAGAGTTGGA CAAGATTTAC AGGAAATTGG ACTTTAGAAT TATTCCAGCC
TTGTGGTGTC TCTATTTCTT GACATCTTTC GGGTCAAGTG CCTATGGTTT GACCTTGACA
ATGAACCTGG AAGTCGGCCA TTCTTTGGGA CAACATTTGC ACCTCACCCC CAAGAACATT
TCGACTGCTT CTGCATTGTA CTATGTTGGT TACATTATTT TTGATGTTCC CATGAACTTA
ATAATGACTA AGGTTAGCCC TCAGTCTTGG CTTTCCAGAA TTGTGATTAC TGTTGGTTTG
GTTTATACTT GCTATCACGT TTTGCAATCC AGCGGTGCAC TTATTGCCTG TCGCTTTATT
TCTGGTATGG TTGGCGCTGG TACTTGGCCA GGGATGAGTT ACTATATCTC TCTTTGGTAT
CCAAACGAAA GACTGACTAG AAGAATCGGA TATTATTTTA CCGCAGCCCA GATTTCGGCT
GCAGTCGCTG GTTTGGTTAG TGCTGGTTTT CAGAAAATGG ATGGAGTCAG AGGTTACACT
GGTTGGCAAT GGATGTACTT GGTTTATGGT GTGATAACCA TTGCTGTAGG TATCCTGTTG
TTATGGTGGT TGCCTGACAG ACCATTCAAG GAACCTACTG ACAGCCCTAA CAAGTTAATC
CAGTTATACC ATAAGTTCCT TACTCCACCT CACCCATTGA ATGACAAAGA AAAGGAATTA
CATAGAAAGG ATCTTGAGCA TAGATACAAA TTGTTGAAGT GGACTTGGAA AGACGTCATT
GATGTCATCA CTGACTTGAG AATCTGGCCC TTGATTATCA TGTACTTCGG TGTTGTTGGT
ACCGGCTTTG GTTTGGCAGT ATTTGGATCT ACAATTATTG CTACTAACAA CCCTAATCTC
ACCTCTATTC AAGTATCATT ATTGTATGCT CCAATCTGGT TATTTGACTT GGCTGGTATC
TTGATTATCA CTCCTTTCGC CGACAAATTC AAGAGGTTGC GTGCCTTAAT CTTCTCCCTT
GCTTGTCTTG TTATCATGTG CGGAATGTTT GTTACCACTT TTGCACGCGG ATCTTGGAAC
AAGTACGGTG GGTTGTTGAT TGCAGGTTTC GGTTTGGGAC CAACAGTTCC TATATGTATG
TCTTGGACAG CTGAAATATT TGGGCCAAGG TATGGTGATG TTGGAACTGC TGTAAGTGCT
GCTCTTGTCA GTGGTTTAGG CAATCTTGGA TCTGTCACAG CTACCTATGC CTTGTACAGT
GGATGGCCAG CCGACAAAAA GAGATTGTTC AGAAACTCCA ATATGATGTT GGTAGTGATG
TTAGGAGCCA GTATTATTGC CTCTGTAGTG TGTCACTTGC TCAGAAATAG AGTTAGACAA
CAGAAATAG
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| Protein sequence | MNVKELDKIY RKLDFRIIPA LWCLYFLTSF GSSAYGLTLT MNSEVGHSLG QHLHLTPKNI
STASALYYVG YIIFDVPMNL IMTKVSPQSW LSRIVITVGL VYTCYHVLQS SGALIACRFI
SGMVGAGTWP GMSYYISLWY PNERSTRRIG YYFTAAQISA AVAGLVSAGF QKMDGVRGYT
GWQWMYLVYG VITIAVGISL LWWLPDRPFK EPTDSPNKLI QLYHKFLTPP HPLNDKEKEL
HRKDLEHRYK LLKWTWKDVI DVITDLRIWP LIIMYFGVVG TGFGLAVFGS TIIATNNPNL
TSIQVSLLYA PIWLFDLAGI LIITPFADKF KRLRALIFSL ACLVIMCGMF VTTFARGSWN
KYGGLLIAGF GLGPTVPICM SWTAEIFGPR YGDVGTAVSA ALVSGLGNLG SVTATYALYS
GWPADKKRLF RNSNMMLVVM LGASIIASVV CHLLRNRVRQ QK
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