| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_42658 |
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| Symbol | LHS1 |
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| ID | 4837392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 543302 |
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| End bp | 546091 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388707 |
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| Product | Lumen HSP Seventy |
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| Protein accession | XP_001382863 |
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| Protein GI | 150864149 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.464607 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTG TGTTGTTTTG CTTGTGTCTC GTGACCACGG CCTCGTATGT GGCAGCAGCC
ATCTTGGGGT TGGACTATGG CCAACAGTAC ACCAAGGCTG TCTTGCTAGC TCCAGGCATA
AACTTCGAGA TGGTGCTAAC CGACGAGGGT AAAAGGAAAG ACTTATCGGG CATCTCACTT
AGAGCTGACA AGAACGACAT TGAGCGCGTT TATGGTTCCC AGACTGGATC ATTGTGTACT
CGTTTCCCCC AATCTTGTAT ATTGGATATC AAACCTTTGT TAGGTAAATC CATTGATGAT
CCAACGGCAA AGGCATACTT GACTACCCAT CACGGCGTTA AGTTTGTTGC AGACGAAACC
AGAAACAATG CAATTAAGTT TGACTTGGGA TTTGACAACC AAACGTACGT TTTTACTGTC
GAGGAAGTGT TGGCAATGGG ATTGAACGAA ATCAAGTCCA GAGCCTTGGA CGACTTGGAA
GCTAATCCTG CTGCGGCTAC TATAGCTGAG GATGTAGTTA TTGCCGTTCC ACCTTATGCC
AACCAAGCTA CAAGACAGGC TTACTTGGAT GCTTTGCACT TGGCTGACTT TTCCAACCCC
TTGGGCTTGG TCGATGAAGG CTCCACTGTT GCTGTCAATT ATTTGTCGAA CAGAAAGTTG
GAAAAGGCTG ACTACAACGA TGCCAAGGAA TATCACATCG TGTATGACAT GGGTGCTGGA
TCCACTAAAG CAACGTTGTT CTCGTTCTCA GCGTTTAAGA ATGGTTCTCT AGTACTTGAA
TTGGAAGGTA TTGGCTATGA TGAAGAATTC GGAGGCAAAT TATTGTCCAA CTCCATCTAC
GCTGTGATTC TTGAAAAATT CTTAATCCAC TTCAACTTGG AAGAAGCCGA TGTCACACCT
AAAATCGCAG CCAGAATCGC AGAAACAGCC GAAAAGGCTA AGATCATCTT GTCTGCCAAC
AGCGAATACC ACGCTTCTTT GGAGTCTATC TATGACGATA GAGACTTCAA GACTTCTATT
ACTAGAGGTG AATTTGAAGA AATCAACTCA GACTTGATGG GGCGGATCAC TGAGCCTATT
TTGTCATCCT TGAAAGACTC AGGTGTTACT CTTGATAATG TCAAGTCGAT CATTTTGAAC
GGTGGCTCTA CCAGAGTGCC ATTTATTCAG AAACATTTGT CCACTCTAGT TGGTGAAGAT
AGGATCTCCA AATCCGTAAA CACCGACGAA AGTTGTGCCT TGGGTTCAGC TTTAAAGGGC
TTGAAGTTGA AAACATCTTT TGAAAAACCA GGTGAAATCA AAGTCATTGA AAAGAACTAC
AACAATTACG AGTACAGCAT TAATGATGAA AGTATTGTAG TATTTGCTAA GGGATCTGGA
ATCAATGAAA AGTCTAGAGT CAACCTTGGC AAGTTAAACG ACACTGTGGC GATCAATTTA
TATGAAAATG GGTTCTTGTT CAAGTCGTAC AATGTAGAAG ATTTACTTTC GAAGGCTAAG
AAGTTGTCAT GCAACTCGAA AGAAACCAAA GAAATTGTTG CAACCTTCAA ATTGGACAAC
AGCAAACTTT TTGACTTGAA CAAGTTGGAA ATAGAATGTG TTTCACATGA AGATAAGAAG
GGATTTCTCG GCAACTTCTT GAAGAAGCAA GTAGCTACTG AAGAAGAAGA GGAGGATATA
GTGGAATCTG TAGATGAATC CAACAACTCT TCTTCTACCA ACAAGACTGA GAAGGTTGTG
ACTAAAAGAG CAAAGAAGCC CATCACTATT GTTGTTCCAA AGGCAACGTA TCCCCACATC
AAGCCTTTGA ACAGAACTGC AAAGGAAAGA CTTTCTGCCA AGTTGTCCTA CTTGAATGCC
AGAGATGAAC AGAAAATCCA GATGGATCAA CTTAGAAACG TTTTGGAAGC AAAGTGCTAT
GACTTGCGCA ACTTTGTTGA CGACAAAGAG ACAGCCTTGC TTGAGGAAGT AAGCGACGAT
GTCATTTCTG AACATACAAA GTTTGTCAGT GAAACTATTG AGTGGTTAGA ATTTGATAGC
GATGATGCTT CAGTTAAGGA CATCGAAGAT AAGATCAAAG ACTTGTCTGA CAGAAAACTG
AAGTTGGAGG ACATTATTTT GATGAGTGAA ACCGACTTGT CAATTTCTGG AATTAAGAAA
TTGTATGAAG ATGGAAGCAA GATTGTCATG ACCATCCAGT CGCACATGCT TGAGTTTGGA
AGTCAAATCA GTGAAATCAG ACAGAAGTAC GAGAACGCCA GCTTTGATTT CGACAAGGAG
AACAACAGAA TCAAATTACA TTTATTGTCG AAGGGCGAAG ACAAGATGAT GAGCTTTGAC
AGGAACTTGG CAGAGTACAA AAAGGATGTC ACAACAGTAG GAGATTTGAT AGACTTGCCA
GAAGAAGAGT TCAACAAGAT TCCCAGAAGC GAACTTTATG AGTACCAGAA TAAATTGGCC
AAGGGTATTA TTGAGATGCT TGCCGATATC CTTTCTATTG AAACAAGTCA CAATGAGAGA
ATCAAAATGT TCAACACTAA ATACGACCAA CTCTTGAAGA GAAGGGAAAT CAAGGAACTC
AGAAAGAAGT TGAAGGAAGA GCAAGCTGCT GCCAAAGAAG CCAAAGAAGT TGTAGAAGGT
GATGAAGAAG AGGAAGGTGG TATCATTGAA GAAGACGACG AAGAATTCTC CAGTGTTCCA
GTGGAAACGG CGACTCCATC TTCAGAAACC GAACCAGAAC CAGAGGTAGA AGAGAAGGCT
GATGGTGATA TAGAACACGA TGAATTATGA
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| Protein sequence | MKLVLFCLCL VTTASYVAAA ILGLDYGQQY TKAVLLAPGI NFEMVLTDEG KRKDLSGISL
RADKNDIERV YGSQTGSLCT RFPQSCILDI KPLLGKSIDD PTAKAYLTTH HGVKFVADET
RNNAIKFDLG FDNQTYVFTV EEVLAMGLNE IKSRALDDLE ANPAAATIAE DVVIAVPPYA
NQATRQAYLD ALHLADFSNP LGLVDEGSTV AVNYLSNRKL EKADYNDAKE YHIVYDMGAG
STKATLFSFS AFKNGSLVLE LEGIGYDEEF GGKLLSNSIY AVILEKFLIH FNLEEADVTP
KIAARIAETA EKAKIILSAN SEYHASLESI YDDRDFKTSI TRGEFEEINS DLMGRITEPI
LSSLKDSGVT LDNVKSIILN GGSTRVPFIQ KHLSTLVGED RISKSVNTDE SCALGSALKG
LKLKTSFEKP GEIKVIEKNY NNYEYSINDE SIVVFAKGSG INEKSRVNLG KLNDTVAINL
YENGFLFKSY NVEDLLSKAK KLSCNSKETK EIVATFKLDN SKLFDLNKLE IECVSHEDKK
GFLGNFLKKQ VATEEEEEDI VESVDESNNS SSTNKTEKVV TKRAKKPITI VVPKATYPHI
KPLNRTAKER LSAKLSYLNA RDEQKIQMDQ LRNVLEAKCY DLRNFVDDKE TALLEEVSDD
VISEHTKFVS ETIEWLEFDS DDASVKDIED KIKDLSDRKS KLEDIILMSE TDLSISGIKK
LYEDGSKIVM TIQSHMLEFG SQISEIRQKY ENASFDFDKE NNRIKLHLLS KGEDKMMSFD
RNLAEYKKDV TTVGDLIDLP EEEFNKIPRS ELYEYQNKLA KGIIEMLADI LSIETSHNER
IKMFNTKYDQ LLKRREIKEL RKKLKEEQAA AKEAKEVVEG DEEEEGGIIE EDDEEFSSVP
VETATPSSET EPEPEVEEKA DGDIEHDEL
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