Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_42613 |
Symbol | |
ID | 4837541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 2634003 |
End bp | 2635364 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388856 |
Product | predicted protein |
Protein accession | XP_001383253 |
Protein GI | 150864441 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGTTA TAGAAGACCG GACAGAAGCT CTTCTTGAAT GGATCAAGAA TACCGAGGAT GAAACCTTCA AACCCTCGAC CCATTCGTTT ATCTCTCCAA AGATAGAAAT CAAGCAATTC GAACAAAGTG GAAGAGGTAT CGCAGCCAAA GATGACATTA AAAGATCCCA ACAGATCTTG CGGATACCCC ATTCGTTCCT CCTCAATTTC ACAACGGTAG TGAGTCACAT TACAAGACAC AACTCAAATA TCAAGCTCAA GGAGCCTTAC TATTTGGGAA TTTACGTTCC TTTAGAATCT ACGAATAATA ATGATAAGTT CACGAATATA TACAAGAGCC TTGAGCTACA AGATTTATTG GCATTAACAT CGTTCCAGCT ACTATCGCTC TATCTATGTT TTGAAAGACA GAGAATACAC TCCTCGTTCT GGAAACCGTT CCTCGAGATG CTTCCAGATA TCTCTGATTT TCTGTTAAAT CCATTGATTT GGCAAGTTTT GCAAGTAGAC CAATGGGAAG AGCTCATACA ATTTCTTCCA GAATCGGCCA AGAGGCGTGC TGAGGATGTG TACGAAAGAT TCTTGGAAGA CTACGTCGTT GTCAGAGCTC TTGTGTCGAG AATCCTCGAC GACTTGAAGT TAAGTGAATC TTCTGCAGAT GAGTATATTC CCGTCGACCT TTTTCTTTGG GCCTGGATGT GTATCAATTC TCGTTGTCTC TACATGACGA TTCCTCAGGG TAAGACGAAT GCCGATAACT TCACCATGGC ACCATATGTC GATTTCCTAA ACCATTCTTG CAATGATGAG TGCAGCATTC TCATCGATAC GACTGGATTC CATGTTCGTA CCACCACACC ATATATGCCA GGCGACCAAT TGTTTCTCAG TTATGGTCCT CATTGTAATG AATTCTTGCT TTGTGAGTAC GGTTTCGTGA TTCCTCATGA TAACAAATGG AACGATCTTG ACATTTCAGC ATACATTATT CCGCTTCTCA AACCTCAGCA TGTCGAGTTC TTGAAAGAAA ATGATTATTT TGATAAATAT ACCATGACAA ACGAAGGGAT TTCGTTCAGA ACAGAAGTAG TGCTAGCAAC TGTGCAAGAA AATAGTCCTC TGGTGTCCAG AAGACTCCAA GCACTATTGA ATGGCATTGG GGATGGGGCT ACTTTCAAGA GCCACTCTCA TGTTCTCTTG AAAGAAATAA TCAAAAAAGT ACTACACGAA TGCGATCAGT ACAAGCATCT CGAGTACAAC GACGACAAGG ACATTAATAC TCGAGAACGA AAGAAAACCA TTGGTATTCT CTACAAGAAC AGAAGCGAGA TAGCCAATAA CATTCTTTCC ACGCTAGAAT GA
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Protein sequence | MTVIEDRTEA LLEWIKNTED ETFKPSTHSF ISPKIEIKQF EQSGRGIAAK DDIKRSQQIL RIPHSFLLNF TTVVSHITRH NSNIKLKEPY YLGIYVPLES TNNNDKFTNI YKSLELQDLL ALTSFQLLSL YLCFERQRIH SSFWKPFLEM LPDISDFSLN PLIWQVLQVD QWEELIQFLP ESAKRRAEDV YERFLEDYVV VRALVSRILD DLKLSESSAD EYIPVDLFLW AWMCINSRCL YMTIPQGKTN ADNFTMAPYV DFLNHSCNDE CSILIDTTGF HVRTTTPYMP GDQLFLSYGP HCNEFLLCEY GFVIPHDNKW NDLDISAYII PLLKPQHVEF LKENDYFDKY TMTNEGISFR TEVVLATVQE NSPSVSRRLQ ALLNGIGDGA TFKSHSHVLL KEIIKKVLHE CDQYKHLEYN DDKDINTRER KKTIGILYKN RSEIANNILS TLE
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