| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_42488 |
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| Symbol | |
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| ID | 4837223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2279215 |
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| End bp | 2280618 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388538 |
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| Product | predicted protein |
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| Protein accession | XP_001382667 |
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| Protein GI | 150863998 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.206932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG ACAAGTCCCA GATCAAGATT AAGTTCTTCA CGAACGAAGA AGATGTCTCG
TTGCAAGTTT CAGATGCTCC TTTGTATGTT CCAGTGTCAT TGAAGAGATA TGGCTTGTCA
GAAGTAGTGA ACCAGCTCTT GGGAAACGAT GGGGAGAATG ACGATTCGAA GCCAATACCG
TTCGATTTCC TCATAGATGG TGTATTGTTG CGTACTTCGA TCCAGGACTA TTTGACGAAA
AATGGACTTT CCAGCGAAAC GTTCTTGTCT TTAGAATACA CAAGAGCTGT ACTTCCACCT
TCTTTCCTTG CATCTTTCAA TAACGAAGAT TGGATTTCCT CTCTTGACAC GATAAACAAG
ACTTTGCCCA GCGTTACATT GTCGAACATG ATGATTTCAC AGCCCAAGAT CTTGTCCGGC
TCATATGACG GTATAGTTAG AACTTACAAC ATGTCTGGAA ATGTAGAGAA GCAATATGTG
GGCCATTCTG GTCCCATTAG AGCCGTCAAG TGGGTTTCAC CTACTAGAAT CGTTTCGGCT
GGTAACGACA GACAAGTAAG ATTGTGGAAA ACGTCTGCTG ACGATGGAAG TATACCCGAA
GAGGACGAAG AAGCTGAAGA CGGTAGAACG TTGGCTATTT TAGAGGGTCA CAAGGCTCCC
GTAGTGGCAT TGGCTGTCGA AAACACTTCC AACAGGATAT TGTCTGCTGG TTACGACCAT
TCTATTGGAT TCTGGTCTAC AAACTATAAG GAAATGACGA CTATACAGCC TTTAGAATAT
GATTCTAATG TTTTATCATC GTCGTCCAAG AAGAGAAGAA AGATGGCTCT TCAAGATTCG
ACTATTAGAC GTCGTTCTCC ATTGGCTCTT TTGGATAGCC ACACTCAACC TGTAGAAGAT
GTTATTTTCG ACAACACCGA CGCCACCGTT GGTTACTCTG TATCCCAAGA TCACACCATC
AAAACATGGG ATTTGGTTAC TTCTCGTTGT ATCGATACCA GATCTACCGG CTATTCATTG
CTCTCTATCG TGCAGTTACC CAAACTGAAG TTGTTGGCTA CTGGTTCTTC TGCTCGTCAT
ATCAACTTGC ACGATCCCAG AATATCCAAC AACACCACGG AACAGACCAC TTCCAAACTC
GTGGGCCATA CAAACTTTGT GGTCAGCTTG GCTGCTTCAC CAAATAATGA TAACATGTTT
GCATCTGGTT CCCACGATGG CACTGTCAAG GTTTGGGACA TAAGAACAGA TAAATCTTTG
TACACTATCA CTCGTGAATC ACCAGAAGCT GTCAAGGGTG CCGACAAGGT GTTTGCAGTT
TCGTGGGACA ACGAGATCGG TATCATCAGC GGTGGCCAGG ATAAGAAGAT CCAAATCAAC
AAGGGTAGCG ACATATCTAA GTAG
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| Protein sequence | MSDDKSQIKI KFFTNEEDVS LQVSDAPLYV PVSLKRYGLS EVVNQLLGND GENDDSKPIP
FDFLIDGVLL RTSIQDYLTK NGLSSETFLS LEYTRAVLPP SFLASFNNED WISSLDTINK
TLPSVTLSNM MISQPKILSG SYDGIVRTYN MSGNVEKQYV GHSGPIRAVK WVSPTRIVSA
GNDRQVRLWK TSADDGSIPE EDEEAEDGRT LAILEGHKAP VVALAVENTS NRILSAGYDH
SIGFWSTNYK EMTTIQPLEY DSNVLSSSSK KRRKMALQDS TIRRRSPLAL LDSHTQPVED
VIFDNTDATV GYSVSQDHTI KTWDLVTSRC IDTRSTGYSL LSIVQLPKSK LLATGSSARH
INLHDPRISN NTTEQTTSKL VGHTNFVVSL AASPNNDNMF ASGSHDGTVK VWDIRTDKSL
YTITRESPEA VKGADKVFAV SWDNEIGIIS GGQDKKIQIN KGSDISK
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