| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41430 |
|---|
| Symbol | ACPS |
|---|
| ID | 4837246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | + |
|---|
| Start bp | 2275763 |
|---|
| End bp | 2276173 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640388561 |
|---|
| Product | holo-(acyl-carrier protein) synthase |
|---|
| Protein accession | XP_001382665 |
|---|
| Protein GI | 126132280 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) |
|---|
| TIGRFAM ID | [TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.637045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0919378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCTA CTAGCAAATG TTTAAAAGTG CTTGGAATAG GCGTGGACGT GGTCAATACG
GACAGGTTCC GACGTCTAGT GAGCAGAGAT CCCAGGTTTT TAGCCAAACT CACTGCTAGA
ATTCTCCATC CACAGCACGA ACTTCCAGAA TTCTTCCGAA TCAGCGATGC CGAAAACAAA
GTTAAGTTTC TTGCAGGGTC ATGGGCTTCC AAGGAGGCTG TTTTCAAGAC TTTGGACATC
AGCAGCCAGA AACAGTTCCA ATTTAAACAT TGGTTCAGAA AATACTCTGA ACAGGGTAAA
CCTCATATAT GCAACGACAA CTACCCGCAA AGCGAGCAGG AAGAGTTCTT GTTAAGTATA
TCTCACGACA GCAATGTCCT TGTGGCGAGT GCCTTGAGAC AGCAGAAGTG A
|
|---|
| Protein sequence | MRPTSKCLKV LGIGVDVVNT DRFRRLVSRD PRFLAKLTAR ILHPQHELPE FFRISDAENK
VKFLAGSWAS KEAVFKTLDI SSQKQFQFKH WFRKYSEQGK PHICNDNYPQ SEQEEFLLSI
SHDSNVLVAS ALRQQK
|
|---|
| |