| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_41057 |
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| Symbol | VPS24 |
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| ID | 4837559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 26048 |
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| End bp | 26668 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388874 |
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| Product | endosomal Vps protein complex subunit |
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| Protein accession | XP_001382763 |
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| Protein GI | 150864071 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5491] Conserved protein implicated in secretion |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.803501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGACAA TAAACCTGTT GTTGAGAAAA AACAAGCGAG AACTCGATCG CTCAATGAAT
CAATTACAGC CTTTGAAGAA AAAGACGGAG GCACTAATCA AAAGAGCTGT CAAGGACAAT
GACTTGAAGA CGGCCAAGAT CTACGCTAAG GAGTTGATCA ATGTCAACAG ACAATACAAC
AAGTTGTACA CTTCCAAGAC GAGAATTGAC TCTATTAATA TGGCCATCAA TGAACAGTGG
CAGATGAACA AGCTAACACA ATCTTTGCAT TCGCTGGCAG TTGTCATGAA AGACGTCAAC
CAATTGGTGA AGATCGGCGT GGTGCTGGCT ACAATGCAAG AGCTTTCCAA GGAGTTGATG
AAGGCAGGAA TTATCAATGA GATGATGGAC GACGCCATCG ACTTGGACTT TGAAGAAGAT
GAAGAGTTGG AACACGAATC CCAAGAGGAA GTCAACAAAA TCATAGCCAG CTTGACAGAA
GACAAGTTCT CCAAGATCAG CAACGAGGTT CCTACCAATA GCGTGGACGT TGAGGAAGAA
CCTAAGGCTG AAGTACAAGA GGAGGAAGAT ACAGAGGCTC TCGACGAAAT GAGAGAGCGT
TTACGAGCCT TACAAGAGTA G
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| Protein sequence | MRTINSLLRK NKRELDRSMN QLQPLKKKTE ALIKRAVKDN DLKTAKIYAK ELINVNRQYN
KLYTSKTRID SINMAINEQW QMNKLTQSLH SSAVVMKDVN QLVKIGVVSA TMQELSKELM
KAGIINEMMD DAIDLDFEED EELEHESQEE VNKIIASLTE DKFSKISNEV PTNSVDVEEE
PKAEVQEEED TEALDEMRER LRALQE
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