Gene PICST_40885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_40885 
SymbolQNS1 
ID4836867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp358018 
End bp360159 
Gene Length2142 bp 
Protein Length713 aa 
Translation table12 
GC content45% 
IMG OID640388182 
Productglutamine-dependent NAD(+) synthetase 
Protein accessionXP_001382833 
Protein GI150864127 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0171] NAD synthase 
TIGRFAM ID[TIGR00552] NAD+ synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCATT ACATCACCAT TGCAACATGC AACCTCAACC AATGGGCTCT TGACTTCGAA 
GGAAACAGAG ACAGAATTCT CGAGTCCATT AAGGAAGCCA AACGTCAAGG TGCCAGATTG
AGAGTAGGTC CCGAACTCGA AGTGTGTGGT TACGGCTGCT TGGACCACTT TTCCGAAAAC
GACTTGTACG ACCATTCATG GGAGACGTAC GGTCAGATTT TGGCTGATCC AGCCACCCAC
GACATCTTGC TCGATATTGG GATTCCCATT ATCCACAAGT CCATCAAGTA TAACTGTAGA
ATTATATCGT ACAATGGTCA GATCTTGTTG ATTAGACCCA AACTCTATTT GGCCAACGAT
GGTAACTACC GTGAAATGAG ATATTTCACC CCTTGGAACA GACCAAAATA CTACGAAGAG
TACCAGTTGC CCAAGTTCAT TGCTAAGATT ACGGGCCAGA ATAGAGTCAC CTTTGGTGAT
TGCATTGTAG AAACCTTGGA AACAAGACTA GGCTGTGAGA CCTGCGAGGA ATTGTTCACT
CCAGAATCTC CACATATTGC CATGGCGCTT GATGGTGTAG AAATATTCAC CAACTCCAGT
GGGTCTCACC ATGAGTTGCG TAAATTAGAT ACCAGGTTGC AGTTGATCAC TGAGGCTACC
GAGAAGTGTG GAGGAGTTTA TCTTTACGCT AACCAGAAAG GTTGTGACGG TGACCGTTTA
TACTACGACG GTTGTGCTTC TATCATCGTC AACGGTAAGA TGGTTGCTCA GGGTTCACAG
TTCTCTCTTC AGGATGTAGA AGTAATCTCA GCTACAATTG ATTTGGACGA TGTCAGATCT
TATAGAAACC AGAAGTCGGC ATCAAACCAA GCTGTTAACC AATCTTCCAC CTACAAGGCA
ATCCAGACAG ATGTCGAATT GTCGCCTAGC TCTCATGTAT TTGATCCTAC TATCATTCCC
ACCAAAACAA GGCCTATCAA GTTCCATTTG CCCGAAGAGG AAATTGCTCT AGGTCCAGCC
TGCTGGTTGT GGGACTACTT GAGAAGATCC AAGTGTGGAG GCTACTTTCT TCCTTTGAGT
GGAGGTATCG ACTCCTGTGC CACTGCTGTC ATTGTCCATC TGATGTGCAG ATTAGTTGTA
GCTTCTATAA GCGATCCTCA GGTGTTGACA GATATCCAAG CTTTGACTCA CGATCCTAGC
TTCGTGCCAA AGACGCCTCA AGAGATTGCA GAAAAATTGT TCTACACCAG TTTCATGGGT
ACAGAGAACT CTTCGGCGGA AACCAGATCC AGAGCCAAGG AGTTAGCTTC TAAAATCGGG
TCCTATCACG TAGACTTGAA CATGGATAAC TTGGTCTCTT CTGTAGTTAG CTTGTTTGAA
GTTGCCACTG GTAAAAGACC CATTTTCAAG ATCTTCGGAG GTTCTCAAAC TGAGAACTTG
GCCTTGCAAA ACATCCAGGC TAGACTCAGA ATGGTTTTGA GCTATTTGTT TGCACAGCTT
TTACCTTGGA CGAGAGGTAA GTCTTCTGCT GGTCTTTTGG TATTGGGAAG TGCCAACGTA
GACGAATGCT TGAGAGGCTA CTTGACCAAA TATGACTGTT CCTCGGCAGA TATCAATCCT
ATCGGAGGTA TTTCCAAGAC TGACTTGAAG CGTTTCATTG CCTGGGCCGA AATCAACTTT
GAGCTACCAA TATTGAACGA CTTTATCACG GCAACCCCAA CGGCTGAATT AGAGCCTATC
ACTGCTGACT ATGTTCAGAG TGACGAAATA GATATGGGCA TGAGCTACGA TGAGTTGTCC
AGATTTGGTA GATTAAGAAA AGTAGACAAA TGTGGGCCAT TGGCTATGTT CATCAAGCTT
TACCACGAAT GGTCACAACC TCCATATAAC CTCACTGCCG AGCAGGTAGC TGAAAAGGTC
AAACGCTTCT GGTTCTTCTA CGCAATCAAC AGACACAAAA TGACGACCAT GACTCCAGCA
TATCACGCAG AACAATACTC ACCTGACGAT AACCGCTTTG ATTTGAGACC ATTCTTGATT
AACCCTCGTT TCCCATTTGC AAGCAAGAAG ATAGACGAAA TAGTCAAGGC TATCAACGAG
AGAAACAAGG AGATTGACCT GAACAATATT AGTGTTGATT AA
 
Protein sequence
MGHYITIATC NLNQWALDFE GNRDRILESI KEAKRQGARL RVGPELEVCG YGCLDHFSEN 
DLYDHSWETY GQILADPATH DILLDIGIPI IHKSIKYNCR IISYNGQILL IRPKLYLAND
GNYREMRYFT PWNRPKYYEE YQLPKFIAKI TGQNRVTFGD CIVETLETRL GCETCEELFT
PESPHIAMAL DGVEIFTNSS GSHHELRKLD TRLQLITEAT EKCGGVYLYA NQKGCDGDRL
YYDGCASIIV NGKMVAQGSQ FSLQDVEVIS ATIDLDDVRS YRNQKSASNQ AVNQSSTYKA
IQTDVELSPS SHVFDPTIIP TKTRPIKFHL PEEEIALGPA CWLWDYLRRS KCGGYFLPLS
GGIDSCATAV IVHSMCRLVV ASISDPQVLT DIQALTHDPS FVPKTPQEIA EKLFYTSFMG
TENSSAETRS RAKELASKIG SYHVDLNMDN LVSSVVSLFE VATGKRPIFK IFGGSQTENL
ALQNIQARLR MVLSYLFAQL LPWTRGKSSA GLLVLGSANV DECLRGYLTK YDCSSADINP
IGGISKTDLK RFIAWAEINF ELPILNDFIT ATPTAELEPI TADYVQSDEI DMGMSYDELS
RFGRLRKVDK CGPLAMFIKL YHEWSQPPYN LTAEQVAEKV KRFWFFYAIN RHKMTTMTPA
YHAEQYSPDD NRFDLRPFLI NPRFPFASKK IDEIVKAINE RNKEIDSNNI SVD