Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_40324 |
Symbol | CAT1 |
ID | 4837286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 735590 |
End bp | 737050 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 12 |
GC content | 49% |
IMG OID | 640388601 |
Product | Peroxisomal catalase (PXP-9) |
Protein accession | XP_001382907 |
Protein GI | 126132764 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCTG TCTTCACCAA CTCCAATGGC TGTCCCATCC CAGGCGACGC CTTTGCTACC CAGAGAATCG GCAAGCACGG TCCTCTCTTG TTGCAGGACT TCAACTTGAT TGACTCTCTT GCCCACTTCG ACAGAGAAAG AATCCCAGAA AGAGTTGTCC ATGCCAAGGG ATCCGGTGCC TACGGTGTTT TCGAAGTCAC AGACGACATC ACAGATGTCT GTGGTGCCGC TTTCTTGGAC ACCATCGGTA AGAAGACCAA GGTTTTCACC CGTTTCTCCA CTGTTGGTGG TGAAGCCGGT TCTGCTGACA CCGCTAGAGA CCCAAGAGGT TTCGCTACCA AGTTCTACAC CGAAGAAGGT AACTTAGACT TGGTCTACAA CAACACTCCA GTCTTTTTCA TCAGAGACCC TTCCAAGTTC CCTCACTTCA TCCACACCCA AAAGAGAAAC CCAGAGACCC ACTTGAAGGA TGCTAACATG TTCTGGGACT ATTTGACCAC CAACCAGGAA GCCATCCACC AAGTTTGTAT TCTTTTCTCC GACAGAGGTA CCCCAGCTTC CTACAGAGAA ATGAACGGTT ACTCTGGACA CACCTACAAG TGGTCCAACA AGAAGGGTGA ATGGTTCTAC GTGCAGGTCC ACTTTATTTC TGACCAGGGT ATCAAGACTT TGTCGAACGA AGAGGCTGGT GCCTTGGCCG GTTCAAACCC AGACTATGCC CAAGAAGACT TGTTCAAGAA CATCGCTGCA GGCAACGGTC CATCGTGGAC TTGTTATGTG CAGACCATGA CTCAAGAACA GGCCAAGAAC GCTCCATTCT CAGTCTTTGA CTTGACCAAG GTCTGGCCTC ACAGCGATTA TCCTTTGAGA AGATTCGGTA AGTTCCAACT TAACGAAAAC CCAAAGAACT ACTTTGCCGA AGTTGAACAA GCTGCCTTCT CTCCAGCCCA CACTGTTCCA TACATGGAAC CATCGGCTGA CCCAGTTTTG CAATCGAGAT TGTTCTCTTA TGCCGACACA CACAGACACA GATTGGGTAC AAACTACACC CAGATTCCTG TCAACTGTCC AGTTACAGGC GCTGTCTACA ACCCACACAT GAGAGACGGT CACATGAACG TGAACGGCAA TTTGGGAAGC ACTCCAAACT ACTTGGACAC TTCTAAGCCT GTTGAATTCA AGCAATTCGC CTTGCAAGAA GAACAAGAAG TCTGGGAAGG TGCTGCTTGT CCATTCCACT GGAAGTACAC TGATGAAGAC TTCAAGCAAG CCACAGCTTT GTACAATGTC TTGAAGAGAT ATCCTAACCA ACAGGCCCAT TTGGCCCACA ACGTCTCAGT GCATGTTGCT GCTGCTGACG CTCACATCCA AGACAGAGTG TTTGAAATGT TCTCCAAGGT CCACCCAGAC TTGGGCGCTG CCATTAAGAA GGAAACCTTG CAATTGTCTC CAAGAAAGTA A
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Protein sequence | MAPVFTNSNG CPIPGDAFAT QRIGKHGPLL LQDFNLIDSL AHFDRERIPE RVVHAKGSGA YGVFEVTDDI TDVCGAAFLD TIGKKTKVFT RFSTVGGEAG SADTARDPRG FATKFYTEEG NLDLVYNNTP VFFIRDPSKF PHFIHTQKRN PETHLKDANM FWDYLTTNQE AIHQVCILFS DRGTPASYRE MNGYSGHTYK WSNKKGEWFY VQVHFISDQG IKTLSNEEAG ALAGSNPDYA QEDLFKNIAA GNGPSWTCYV QTMTQEQAKN APFSVFDLTK VWPHSDYPLR RFGKFQLNEN PKNYFAEVEQ AAFSPAHTVP YMEPSADPVL QSRLFSYADT HRHRLGTNYT QIPVNCPVTG AVYNPHMRDG HMNVNGNLGS TPNYLDTSKP VEFKQFALQE EQEVWEGAAC PFHWKYTDED FKQATALYNV LKRYPNQQAH LAHNVSVHVA AADAHIQDRV FEMFSKVHPD LGAAIKKETL QLSPRK
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