| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39422 |
|---|
| Symbol | |
|---|
| ID | 4851871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | - |
|---|
| Start bp | 3057285 |
|---|
| End bp | 3058703 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | |
|---|
| GC content | 44% |
|---|
| IMG OID | 640393579 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001387152 |
|---|
| Protein GI | 126275867 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.423389 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCTC TCGTTTCGCT CCCGATGATG GGTGCCTCTT CCTTGGCTTC GTGCTTCGGA
GCTGCTGCCT GTTCTGCACT TTGTTCCACG ATAGGAGGCA CATTCCAATC GTCTATTATG
ACCAGAATAA CATATGCCAT GTTGCTTTTA GTGAACTCAT TGATATCGTG GATAGCGCTA
TCGCCGTTTA TTGTTCACAA AATCGAGAAA GCCACCTTCG GCTTTATCAA TAGCAAGTGT
GGCCAAGATG GCTCTCAGTG TATTAGCTTT TCATCTGTCC ACAGAGTCAA CTTTGCTTTG
GGGGTCTTAC ATTTAGTCTT GGCTGTGTTG TTGATAGATG TCAAGTCTAC AGCCAACCCT
CGTGCAGTAA TCCAGAACGG GTGCTGGAGA ATCAAGATAT TCAGCTGGTT GACGTTTATT
GTCATCAACT TCTTGCTTAT CCCCGATCAT TTCTTTGTTT TCTACGGTAA CAACATCGCC
ATCATATTTT CCACCATTTT CTTAGGAATC GGACTTATCT TGCTTGTAGA CTTTGCACAT
GCCTGGGCTG AGAAATGCTT GGAAAAGATC GAGTTAGAGG AATTGACTGG TGAAGGAGAT
TCCTCTTTCT GGAAGAAGTT GTTAGTGGGA GGTACTTTGA CTATGTATAT TTCGAGCATA
ATCTTAACTG TGCTCATGTA CTGGTTCTTT GCTGGAAACG GCTGTAGTAT GAACAAGACC
GCTATCTCGT TGAACATGAT CTTTGGCTTA ATAATCTCAG CCATGTCTAT TAACCAGACT
ATCCAAGAAT ACAATCCTCA CGCTGGACTT GCCCAATCTT CCATGGTAGT CTTCTATTGT
ACGTATCTTG TCATGAGTGC TGTCGCATCA GAGCCAGACG ACAAGTTCTG CAATCCATTG
GTAAGATCTA GAGGTACTAG AACTGCCAGT GTCATCTTAG GTGCCTTTTT CACGTTTATT
GCAGTAGCCT ATACCACCAC TAGAGCAGCA GCAAACTCCG CTTTCAGCTC AGAACCAACT
GCAGATCCTT ACATCAATGC CCAGCCAGCG GTTAGAAACG AAATGAGATA CCAGGCTATA
AAGCAGGCTG TAGACGAAGG CTCTTTGCCT GAAAGTGCCC TTAACCAAAT GGACTTGTAT
GACGAAGACA TGGAAGGCAA CAGCAACGAT GAAGAAAGAC AGAAAGTCAA GTATAACTAC
TCATTGTTCC ACATTATCTT CTTTTTGGCT ACCCAGTATG TCGCTACGTT GTTGACTATC
AACGTGAAGC AAGACGAAGT CGGTGACTTT GTACCTGTTG GCAGAACATA CTTTGCCAGT
TGGGTCAAGA TTATTAGTTC GTGGGTATGT TTTGTTTTAT ACGGATGGAG TTTGGCTGCC
CCTGTAGTTT GGCCAGACAG ATTTGGTGTT CAATTGTAA
|
|---|
| Protein sequence | MGALVSLPMM GASSLASCFG AAACSALCST IGGTFQSSIM TRITYAMLLL VNSLISWIAL
SPFIVHKIEK ATFGFINSKC GQDGSQCISF SSVHRVNFAL GVLHLVLAVL LIDVKSTANP
RAVIQNGCWR IKIFSWLTFI VINFLLIPDH FFVFYGNNIA IIFSTIFLGI GLILLVDFAH
AWAEKCLEKI ELEELTGEGD SSFWKKLLVG GTLTMYISSI ILTVLMYWFF AGNGCSMNKT
AISLNMIFGL IISAMSINQT IQEYNPHAGL AQSSMVVFYC TYLVMSAVAS EPDDKFCNPL
VRSRGTRTAS VILGAFFTFI AVAYTTTRAA ANSAFSSEPT ADPYINAQPA VRNEMRYQAI
KQAVDEGSLP ESALNQMDLY DEDMEGNSND EERQKVKYNY SLFHIIFFLA TQYVATLLTI
NVKQDEVGDF VPVGRTYFAS WVKIISSWVC FVLYGWSLAA PVVWPDRFGV QL
|
|---|
| |