| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39239 |
|---|
| Symbol | MNN4.2 |
|---|
| ID | 4850869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 281957 |
|---|
| End bp | 285064 |
|---|
| Gene Length | 3108 bp |
|---|
| Protein Length | 911 aa |
|---|
| Translation table | |
|---|
| GC content | 40% |
|---|
| IMG OID | 640392577 |
|---|
| Product | protein involved in mannose metabolism and cell wall synthesis |
|---|
| Protein accession | XP_001387292 |
|---|
| Protein GI | 126273792 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3064] Membrane protein involved in colicin uptake |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTTC TGATACGAAA AAAACACGTC CATCTATTTA TGATCATCGC ATTGCTTCTC
GTGGTGACGG TGATGATGAT AATTACGTCT CACCTCATCT CCGAAGAAAC CAACCAGATC
ATCCGCAACA AGCTTAGAAT CAACTACTTC GACACTTTGG CCAGATCCGT GTATAAACCC
GGAAGTGAAG AAGATGAAAA AAGTCTTGAA GTCGATACTT CTGACCCCGA GTCTTATTTC
AACAGAGAAG TGGAAAAGTT GTACGACGCC AAAAAGAGCT CCGACGTTGA AAACAAGCTC
TGGTTGCTCA ACACGGACAT CCAGGACTCA GAAGTGCAGA TTCCATTTTA CTACTATATG
GATGAGAGCA CTGCTGGTGC TGATCAACTG GTGCAATTCC ACCAATACCA CAAGGAAAAT
AAGCCAGACA TACAGCCCTT TGAGCCTCGT TTCACTTTGG CGATGTACTA CCATTACATC
AAAGCGAGTT TGGAACAGAA TCCCAAGGAG CCTGTTCAAG TACCTTTCAA TTGGTACGAC
TGGGTAGATT TGTCACGTTT AGACAAGTAT TTGTTAGCAC CTTCCAACTT GAAACCCAAT
TGCTCACATC TTGATGCCAG ACCTGAAGAG GAAAAGTTGA ACAAGCAAAA GGAGGAGCAA
AAGCGTATCG AAGACGAAAA GAAGCGTATA GAGGAAGAAA AGAAGCGTAT AGAGGAAGAA
AAGAAGCGTG TTGAAGAAGA AAAGAAAAGA GCCAAGGAAG AAGCCCAGAG AAAGGAAGAA
GAAGAGAAGA AGAGAAAGGA AGAAGAGAAG AAAAGAAAAG AAGAAGAAGA AAAGAAGAAA
GCTGAGGAGC AGCAAAGAAA ATTGCTCGAA GCGAATGTAC CTCAGGAACA GAAATTAGAC
AACATCGTAG ACAATGATAC TAAACAGGTA CCAGTGGAAG CACTTCCTGA TGTCAATAGA
CCGGATGCAG CAAAACAACC ACAGGAAGTT AAACAACCTC AGGAAGTTGA ACAACCACAA
GAAGTCAAAC AGCCACAAGA AGTTAATCAA CCACAAGAAG TTAAACAGCC ACAAGAAGTT
AATCAACCAC AAGAAGTTAA ACAACTTCAG GAAGTTAAAC AACCTCAGGA AGTTAAACAA
CCACAAGAAG TCAAACAACC ACAAGAAATT AATCAACCTC AGGAAGTTAA ACAACCACAA
GAAGTTAATC AAGTACAAGA AATTAAACAA CCACAAGAAG CTGCTCGTCA GGGTGAATCT
GAAAAATCTG AAGAACAGCA GAAAAATGAA CAAAATAATG TTCAGCAGAA GCAGAATTTG
AACAAAAGAC AGGACGATGC TGAAGAAGAA AGACCAAGAC TCCAAAAACG TTTATCTGCT
AATGCTCCTG ATTTTTTCTG TGAGGATAAT AGTGACTTTC TTCGTGAACA TGATAACGGG
CATACTGTCC ATCCTGGTTT CAATGTGTTC AGGAGTTCTG GAAAGACCAC ACCAGAAAAG
GCTATTCTTT CTGGAAAATC GTATCTCTAC TCGTTTGCAC CAGCTCCGAC TATGATTCTC
TTTTTGACTA GTGATGGTTC ATATAATGTA TCTGTCAACT CTAACCAAAA GCTTCTTAAC
AATGGTTTGG TAGAACAATA CATTGCTGAT ACTAAGTCGC ATACCATTGA TATTATCCAT
GAATTAAGGT CGTTACGGAA GGCTTTTCCT CCAAACAAGC ATCAAGTAAT GACAGACTAT
AAAGTCAATA TTCCAGAAGA AAACTTTGAG CTCAAGACAG ATGAGTTAAT TAAGGGTTAC
GAATCTATAT TGCTTGACGG AAAGCAACTT CCTAGCAACG AATTAAAGTA TTACCACAGT
TTGAAATACT CCGACCATGA AGTCAAGAAT GGCGGTCCGC CAAAGTACTT CACTGAGGCT
CGTTTATTGA CCAACTTGTT GGGTGACCAT TATGATTGGA GATTCTTCAA CGGTGTAATC
TATGGCTCAT ACGAACAAAC GTTGATTTTA CATAGAATGG TCCGTGCCTG GTTGTCGTTT
ACCCGTAAAA ATGGAATTGT AACATGGGTA GCCCATGGAT CCTTATTATC CTGGTACTGG
AATGGTATTG CATTCCCATG GGATAACGAT ATCGATGTCC AGGTTCCAGT TATGGATTTG
CACAAGTTAT CGCTTCATTT CAACCAGACT TTAGTTGTGG AAGATGCAGA AGATGGATTC
GGTCGTTACT TCTTGGATTG TGGTACGTTT ATCACTTTAA GAGCAAAGGG TAATGGCAAT
AACAATATCG ATGCCCGTTT CATTGATGTT GATTCTGGTC TTTACATCGA TATTACCGGA
TTGGCATTGT CTCTGACTCT GCCCCCAGAC CGTTATAAGA AGAACTTACC TGCAAACTGG
AAAATCGATG GGAATGATTA CGTTCCAACT AATAGACAAT TGAAAATCTA CAACTGCCGA
AACAATCACT TTTCCAGCTT GAGTGAATTG AGCCCTCTTA TCAAAACTTC TATTGAAGGT
GAAATTGGTT ATGTTCCTCA GAAATACACT GACATTTTGA CTGTAGAATA TTCTAAGGGT
ATGTTGAACA AGAAATTCCA GGGGCATGTC TTTTTACCTC AGGTTAGATT GTGGCTCCGT
GAAGAAGACT TGTACTATTT CATCTACCAT CGTGAAAAAT GGAACAAGTA CCACAGTTTC
ACGATGAAAT ATGCCAACAG CGATGATGGT GAAGACCAGG AGTTTTTCAC GGACTTACAG
TATGAGTTGA CGGAGGATGA AAAGAAGCAA TTGAGAGCAA AGTCACACAG CCCTCTCATG
TTGAAGGATG ATGAGATGTC CACCATCTTC AAATTTACGG AAGATGAGTT ATTGCAACTT
CTCCACAAGG ATGAAATCTT CATGGCCTAT TACGGTTCCA AAGATTTTAC TTCTTTCCAC
GAGGAAGAAA TCATGCATTT ATTATTTGGC AAATCTACAG CTCAATTAAT CAACGATGCC
CCAGACTTCA AGCCAATGAA GTATGATCCA TTCCTCTTCA AGATGCATAA CGAATACATT
ACCTACGAGG AGGAGGTCAA CCGCTACTTG GCCCTCTTAA CAGCATAC
|
|---|
| Protein sequence | MFFLIRKKHV HLFMIIALLL VVTVMMIITS HLISEETNQI IRNKLRINYF DTLARSVYKP
GSEEDEKSLE VDTSDPESYF NREVEKLYDA KKSSDVENKL WLLNTDIQDS EVQIPFYYYM
DESTAGADQL VQFHQYHKEN KPDIQPFEPR FTLAMYYHYI KASLEQNPKE PVQVPFNWYD
WVDLSRLDKY LLAPSNLKPN CSHLDARPEE EKLNKQKEEQ KRIEDEKKRI EEEKKRIEEE
KKRVEEEKKR AKEEAQRKEE EEKKRKEEEK KRKEEEEKKK AEEQQRKLLE ANGESEKSEE
QQKNEQNNVQ QKQNLNKRQD DAEEERPRLQ KRLSANAPDF FCEDNSDFLR EHDNGHTVHP
GFNVFRSSGK TTPEKAILSG KSYLYSFAPA PTMILFLTSD GSYNVSVNSN QKLLNNGLVE
QYIADTKSHT IDIIHELRSL RKAFPPNKHQ VMTDYKVNIP EENFELKTDE LIKGYESILL
DGKQLPSNEL KYYHSLKYSD HEVKNGGPPK YFTEARLLTN LLGDHYDWRF FNGVIYGSYE
QTLILHRMVR AWLSFTRKNG IVTWVAHGSL LSWYWNGIAF PWDNDIDVQV PVMDLHKLSL
HFNQTLVVED AEDGFGRYFL DCGTFITLRA KGNGNNNIDA RFIDVDSGLY IDITGLALSL
TLPPDRYKKN LPANWKIDGN DYVPTNRQLK IYNCRNNHFS SLSELSPLIK TSIEGEIGYV
PQKYTDILTV EYSKGMLNKK FQGHVFLPQV RLWLREEDLY YFIYHREKWN KYHSFTMKYA
NSDDGEDQEF FTDLQYELTE DEKKQLRAKS HSPLMLKDDE MSTIFKFTED ELLQLLHKDE
IFMAYYGSKD FTSFHEEEIM HLLFGKSTAQ LINDAPDFKP MKYDPFLFKM HNEYITYEEE
VNRYLALLTA Y
|
|---|
| |