Gene PICST_37954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37954 
Symbol 
ID4851015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp718746 
End bp719270 
Gene Length525 bp 
Protein Length174 aa 
Translation table 
GC content46% 
IMG OID640392723 
Productpredicted protein 
Protein accessionXP_001387776 
Protein GI126273977 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0776157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGA GAATAGGAAC TTCGGCTGCC GCTCTTACCA GAGTGTGGCA CCATGTCGAT 
GCCGCCTCAG ATCCTAGAAC CTTGGGTCGT TTGGCTGCCA GCATTGCTAT AACTTTACAA
GGCAAGCACA AGCCTACTTA TTCACCAAAC AGAGACCATG GAGACTACGT CGTAGTGACA
AACTGCAAGC ATTTGAAGGT GACGGGTAAC AAATTGCAAG ACAGACATTA CTGGTCGCAT
ACAACACGCC CTGGTTCGCT TAACTTGATT CCTATGGAAA GAATGATAGC CAACAAGGGT
TATGGAGAAA TCTTGAGAAG AGCCGTTAAG GGTATGATTC CTAAAGATAA GGCAAGATTG
GTGAGAATGG ACAGATTGAA AGTTTACGAT GGCCACGAAC ATCCGTACGT GGACAACTTG
ATTGCCTTTG CTGACGAAAC ACCAGAAATG CTTGCTAAGG CTGAAGCCTT GCGGAAGCAA
GAAGCTGAAA ATGCCCAGAT CAGAGAGAAG TACTTGAAAG AGTAA
 
Protein sequence
MSQRIGTSAA ALTRVWHHVD AASDPRTLGR LAASIAITLQ GKHKPTYSPN RDHGDYVVVT 
NCKHLKVTGN KLQDRHYWSH TTRPGSLNLI PMERMIANKG YGEILRRAVK GMIPKDKARL
VRMDRLKVYD GHEHPYVDNL IAFADETPEM LAKAEALRKQ EAENAQIREK YLKE