Gene PICST_37619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_37619 
Symbol 
ID4851081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp886501 
End bp887037 
Gene Length537 bp 
Protein Length178 aa 
Translation table 
GC content43% 
IMG OID640392789 
Productconserved hypothetical protein 
Protein accessionXP_001387807 
Protein GI126274067 
COG category[S] Function unknown 
COG ID[COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAG TATACTACCA CGACAACAAC GACACCCCAG ACAACTTCAC TGATGCTCAC 
AACTCTGGTG TACCTGTTCC TTTAGAGGAT TTGGCTACGA TTGGGGTTTT CTACAAGAAC
ATCACCAACT TGGACGACTT GAACAAACTT GCTACTGAAA GACAGTACAG AAACAGAGAC
GAGGTCAACT TGAACTTGGC TGCTTTCAAC AATGACTTGG ATGCTTACAA CAGAAAAATG
CAGCAGTTCT ACAAGGAACA CTACCACGAA GATGAAGAAA TCAGATACAT TGTAGATGGA
GAAGGCTACT TCGATGTCAG AGACAAGAGC GACAGATGGA TCAGAACCAA GTTGGTAGCC
AACGATTTGT TGATATTGCC TGCAGGGATT TACCACCGTT TTACCTTGAC CAATGACTTG
AAGTACGTCA AGGCTGTAAG ATTGTTTAAA GATGAACCCA AGTGGGAAGC TATCAACAGA
GATGCTGGTA AGTTGAGTGA AGCTCGTGAA GAGTATGTCA AGAGCATTGC TGTATAA
 
Protein sequence
MVEVYYHDNN DTPDNFTDAH NSGVPVPLED LATIGVFYKN ITNLDDLNKL ATERQYRNRD 
EVNLNLAAFN NDLDAYNRKM QQFYKEHYHE DEEIRYIVDG EGYFDVRDKS DRWIRTKLVA
NDLLILPAGI YHRFTLTNDL KYVKAVRLFK DEPKWEAINR DAGKLSEARE EYVKSIAV