| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_37507 |
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| Symbol | CBC2 |
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| ID | 4851226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1249597 |
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| End bp | 1250097 |
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| Gene Length | 501 bp |
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| Protein Length | 167 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392934 |
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| Product | small subunit of the nuclear mRNA cap-binding protein complex CBC |
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| Protein accession | XP_001387884 |
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| Protein GI | 126274212 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.201062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0819638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTGC TTGAGGAGAA GTACAACCAC TCAGCTGAGA GGCTAGACAA GCCCTCGCAG
TATTTAATCA AAAGGGCTGT GCGCAGACAA AACTTTGATA ACCTACAGAA ATCGTTACAT
CTGAAAACTG TTTATGTAGG TAACTTGTCC CATTTCACCA CAGAAGAACA GATTCACGAA
TTGTTCCTGA AGTGTGGTTC CATCGATAGA ATCATCATGG GACTCGACAG AAACAAGTTG
ACGCCCTGCG GATTTTGTTT TGTAGTTTAC AAGTTAGAAG AGGGTTCATT AAATGCTATG
AAGTTCTTAC AAAAGACCAT TTTGGACGGT CAGAGTTTGT CAATTGATTT GGATCCTGGT
TTTAGAGAAG GAAGACAGTT CGGTAGAGGC ATTTATGGAG GTCAAGCCAG TCAAGAAGCA
AGTTCTGAAA ACGGACAGAG GGGTGGCTTC AGAGGCAGAG GTGGATTCAG ATCCAGAGGA
AGAGGATTTA GAGGAGGCCG T
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| Protein sequence | MELLEEKYNH SAERLDKPSQ YLIKRAVRRQ NFDNLQKSLH LKTVYVGNLS HFTTEEQIHE
LFLKCGSIDR IIMGLDRNKL TPCGFCFVVY KLEEGSLNAM KFLQKTILDG QSLSIDLDPG
FREGRQFGRG IYGGQASQEA SSENGQRGGF RGRGGFRSRG RGFRGGR
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