Gene PICST_36366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_36366 
Symbol 
ID4839533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1091963 
End bp1093255 
Gene Length1293 bp 
Protein Length430 aa 
Translation table12 
GC content43% 
IMG OID640390848 
Productpredicted protein 
Protein accessionXP_001385218 
Protein GI150865837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.32878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC TAGTCTCTTC TGACGATACT GGAGTCGTGA AAGAAGTTAT TTGTAACCGA 
GGAACAGACA CGTCAAAGCA AGATGCTACC CAGCCTATTT CTGTGAAGAA CTTCTGTACG
GAGCCTAACT GTAGTAGAAA GAATAGGATA ATCCACATGA TAAACTACCA GGAAAAGTAC
CTTGTGGCCA TCAGAATTGG CGGAGAACTC TCTGTTTATG AGATCGCAGA TGATGAATAC
GAAATTGAGG ACGAATACAA ATACAACCTT TTGCATAACT ATAAATTGGA AGTGTCTTCC
AGTGACAAGC CTATATCGTT ATTCACTGTG GACATCCTCG AGGCTGTAGC TGTGGCATTT
TCATCTGGTA AAGTGTTTTT TGTCAACTTC AACGACGATA AGTTTGATAA AGAGCCAGTT
TTGGTGCAAT TGCCTGGTGG TAAAGAGATT GCCGAGTTCA GCAAGAACCC CAGTGTGGAA
GGCATTTTTG GATATGGTGG AGAAGAGAAC GACGTCAGAA TTGTCAAATT ATATGAGAGT
GATATCACTT CAGAAATTTT TGACACTGAG AATGTCGAAA ATAATTTCAA GTCTGAGGTG
GTGTTCACAG CCAAGAACGT CAAGAACGAC CATCTTGATT TGAGGGTGCC TGTTTGGATT
ACTAAGATCC GATTTTTCAC AGAACAGCCA GAAAAGGGCT ACAAGTTCAT CACAGCAACT
CACTATGGCC AAATTCGAGT ATATGACACA AACCATGGCC GAAGACCAGT GAGAGACTTC
ACTGTTTGTC AAAAGCCGAT TCTCACCTTG ACTTTTGCCA ATGAGGAAGA GAGTGAAGTC
ATAATATCCG ATCTGCATAA CTTGATAGCC AAACATTCGT TGATCCAAGT GGACGACAAG
GCATCCAAGA CTCATTCCGC ATCAGCTGGC GACATTATCA AGCCAGTGGC CAAGTTGCTC
GGCAGGTTTG TAGACCAGTT TGGAGCTACC TATGGCGTAG AAGTCGGTGA AGGGCTACTT
GTCACAGGGG GATTAGATAG ATATCTCAGG GTGTTTGATC TAGCTTCGAG AGAAATTGTT
GCCAAGGTGT ATGTTGGAGT AGAGGTATCG TCTGTGGTGG TTCTTGATTA CGAAGAAGAG
GAACTGCAGG AGGAAATTGT TGGTGACGTC GAGTTGCTCA AAAAACTGGA AAAGAGAAAG
AGAACTCTTC CAGTGGTGGA AAGGGAAGAA AGTGATGAAG AAGACTTGTG GAATCAACTT
GAAGAGAAGG ACATCAAACG CAAGAAGTCG TAG
 
Protein sequence
MKFLVSSDDT GVVKEVICNR GTDTSKQDAT QPISVKNFCT EPNCSRKNRI IHMINYQEKY 
LVAIRIGGEL SVYEIADDEY EIEDEYKYNL LHNYKLEVSS SDKPISLFTV DILEAVAVAF
SSGKVFFVNF NDDKFDKEPV LVQLPGGKEI AEFSKNPSVE GIFGYGGEEN DVRIVKLYES
DITSEIFDTE NVENNFKSEV VFTAKNVKND HLDLRVPVWI TKIRFFTEQP EKGYKFITAT
HYGQIRVYDT NHGRRPVRDF TVCQKPILTL TFANEEESEV IISDSHNLIA KHSLIQVDDK
ASKTHSASAG DIIKPVAKLL GRFVDQFGAT YGVEVGEGLL VTGGLDRYLR VFDLASREIV
AKVYVGVEVS SVVVLDYEEE ESQEEIVGDV ELLKKSEKRK RTLPVVEREE SDEEDLWNQL
EEKDIKRKKS