Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36366 |
Symbol | |
ID | 4839533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1091963 |
End bp | 1093255 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390848 |
Product | predicted protein |
Protein accession | XP_001385218 |
Protein GI | 150865837 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.32878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTC TAGTCTCTTC TGACGATACT GGAGTCGTGA AAGAAGTTAT TTGTAACCGA GGAACAGACA CGTCAAAGCA AGATGCTACC CAGCCTATTT CTGTGAAGAA CTTCTGTACG GAGCCTAACT GTAGTAGAAA GAATAGGATA ATCCACATGA TAAACTACCA GGAAAAGTAC CTTGTGGCCA TCAGAATTGG CGGAGAACTC TCTGTTTATG AGATCGCAGA TGATGAATAC GAAATTGAGG ACGAATACAA ATACAACCTT TTGCATAACT ATAAATTGGA AGTGTCTTCC AGTGACAAGC CTATATCGTT ATTCACTGTG GACATCCTCG AGGCTGTAGC TGTGGCATTT TCATCTGGTA AAGTGTTTTT TGTCAACTTC AACGACGATA AGTTTGATAA AGAGCCAGTT TTGGTGCAAT TGCCTGGTGG TAAAGAGATT GCCGAGTTCA GCAAGAACCC CAGTGTGGAA GGCATTTTTG GATATGGTGG AGAAGAGAAC GACGTCAGAA TTGTCAAATT ATATGAGAGT GATATCACTT CAGAAATTTT TGACACTGAG AATGTCGAAA ATAATTTCAA GTCTGAGGTG GTGTTCACAG CCAAGAACGT CAAGAACGAC CATCTTGATT TGAGGGTGCC TGTTTGGATT ACTAAGATCC GATTTTTCAC AGAACAGCCA GAAAAGGGCT ACAAGTTCAT CACAGCAACT CACTATGGCC AAATTCGAGT ATATGACACA AACCATGGCC GAAGACCAGT GAGAGACTTC ACTGTTTGTC AAAAGCCGAT TCTCACCTTG ACTTTTGCCA ATGAGGAAGA GAGTGAAGTC ATAATATCCG ATCTGCATAA CTTGATAGCC AAACATTCGT TGATCCAAGT GGACGACAAG GCATCCAAGA CTCATTCCGC ATCAGCTGGC GACATTATCA AGCCAGTGGC CAAGTTGCTC GGCAGGTTTG TAGACCAGTT TGGAGCTACC TATGGCGTAG AAGTCGGTGA AGGGCTACTT GTCACAGGGG GATTAGATAG ATATCTCAGG GTGTTTGATC TAGCTTCGAG AGAAATTGTT GCCAAGGTGT ATGTTGGAGT AGAGGTATCG TCTGTGGTGG TTCTTGATTA CGAAGAAGAG GAACTGCAGG AGGAAATTGT TGGTGACGTC GAGTTGCTCA AAAAACTGGA AAAGAGAAAG AGAACTCTTC CAGTGGTGGA AAGGGAAGAA AGTGATGAAG AAGACTTGTG GAATCAACTT GAAGAGAAGG ACATCAAACG CAAGAAGTCG TAG
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Protein sequence | MKFLVSSDDT GVVKEVICNR GTDTSKQDAT QPISVKNFCT EPNCSRKNRI IHMINYQEKY LVAIRIGGEL SVYEIADDEY EIEDEYKYNL LHNYKLEVSS SDKPISLFTV DILEAVAVAF SSGKVFFVNF NDDKFDKEPV LVQLPGGKEI AEFSKNPSVE GIFGYGGEEN DVRIVKLYES DITSEIFDTE NVENNFKSEV VFTAKNVKND HLDLRVPVWI TKIRFFTEQP EKGYKFITAT HYGQIRVYDT NHGRRPVRDF TVCQKPILTL TFANEEESEV IISDSHNLIA KHSLIQVDDK ASKTHSASAG DIIKPVAKLL GRFVDQFGAT YGVEVGEGLL VTGGLDRYLR VFDLASREIV AKVYVGVEVS SVVVLDYEEE ESQEEIVGDV ELLKKSEKRK RTLPVVEREE SDEEDLWNQL EEKDIKRKKS
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