Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36080 |
Symbol | |
ID | 4838702 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1575908 |
End bp | 1577053 |
Gene Length | 1146 bp |
Protein Length | 332 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640390017 |
Product | predicted protein |
Protein accession | XP_001384607 |
Protein GI | 150865404 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.494982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATACG TAAAAGATCT CAGTGATATA CCGTTGAAAC CTCTCCAGGA GACTTTCGTC GACGACCCAA CCTCACTTGA AGAAATCTAC ATTGACGAAT TAATCTTCGA TCTTGAGCAC AAGCTCAAGA ACATCAACAA GCTCTCCATT TTCCATGCCA TCTATATCCT TTCTCAGCTG GTTCAAAACA TCATCAAGCT CCAGTCGGAT CCGGTTTTGT TCCAGCAGTT CAAGAATGAG CAGTTGGCCA AGTACAATAT CGACTTCTCC AGTAGTAGTT GTAGCAGCAG TAGTACAGTC ACTGACAGCC ACGAATCTGA CAGCCACGAA TTCACGCGTG TTTCGCTGCA TTCCTTGTTG CGGTCTCATA CGCCTCCGTT ATCGCCTCCA TTGAAGTTTG CCAAGTTGTC TCAGCCAATT TACCCTCAGT ATTCGTTTAA GGAATCGACA CCAGACTCTT TGGCTAATGA AGAAGTAACG CCAGACTCTA TTGAAGAACG TAAGGAATTG GAAGCTGAGT CTGAAGCCCA GCGAAGTCCT TTCACAGAGC AAGAAGATGA TGACGAGCAA GTAGAAGAAC CGAAGGAGCC TCCGTATATC CCCATCAAGC AGTTGGTGAA GGAACTCAAG CTTGACCCGG TTTCAGATCC TGTCACTAAC TTGAATCTCG ACAGCTTCAA GAAAGAAGTT CTATTCAACA GAGACTCTAA GCGTATCGAG CAGAATCAGC ACCTTCTCAA AATCTTCAAT CTTGTCAAGG TGCCACCTCT TACCATCGAT GAGTTCTTGC TCCGAATCAA GACGTACTCA TCTAGCATTT CGGTGCTGGC CTACATCCAC ACGGCATCAA TGATGTTCAA ACTCTGCATT CTTCTTGACA TCATCCCCCT CAGTCCGGTC AACGTGTACC GGTTCATTTT GGCTTCCTTG CGCTGCTCCA CTAAGAAGTT GGAGGATGTG TACCAAAAAC AGAAATCGTT TGCTACCGTC GGTGGAGTGT CCACACGGGA CTTGTACCGT TTGGAAGTGG GCTTTCTTTA TCTATGCAAC TTCAAGTTGG TTCTTGGTGA GGCAACGCTC AACAAGTTCT TGAACCAGGA CTTTGTCGAC TTGCACACCT TCGTCAAGGA AAACTACCAA AGCTAG
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Protein sequence | MAYVKDLSDI PLKPLQETFV DDPTSLEEIY IDELIFDLEH KLKNINKLSI FHAIYILSQS VQNIIKLQSD PVLFQQFKNE QLANHEFTRV SSHSLLRSHT PPLSPPLKFA KLSQPIYPQY SFKESTPDSL ANEEVTPDSI EEQEPKEPPY IPIKQLVKEL KLDPVSDPVT NLNLDSFKKE VLFNRDSKRI EQNQHLLKIF NLVKVPPLTI DEFLLRIKTY SSSISVSAYI HTASMMFKLC ILLDIIPLSP VNVYRFILAS LRCSTKKLED VYQKQKSFAT VGGVSTRDLY RLEVGFLYLC NFKLVLGEAT LNKFLNQDFV DLHTFVKENY QS
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