| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35952 |
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| Symbol | |
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| ID | 4838493 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1013138 |
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| End bp | 1013736 |
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| Gene Length | 599 bp |
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| Protein Length | 177 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389808 |
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| Product | predicted protein |
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| Protein accession | XP_001384149 |
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| Protein GI | 126135250 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5052] Protein involved in membrane traffic |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.608575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.512731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTT TGCCCGAGCA AGCTAAGAAC TTTTTGTCTC AAATTGATGC TGTATGTATG
GAAACCATTT TGTAAATTAT GTGTTTTCAA GATTTGCAAT ACTAACCGAT ACTTAGAAAA
CTGCCAACCA ACAACTTTTG CATCAATTCG AAAAGCAAAC TGGTTTGCCA AGATCCTATG
CTGTCTTAGC TTTGGTTGCC GTATACTTCG TGTTGATTTT CTTGAACGTT GGTGGCGTTG
GTCAACTTTT GTCCAACATT GCTGGTTTTG TCATACCAGG TTACTACTCT TTGATTGCCT
TGAACACCAG AACTTCCTCT GATGACACCC AATTGTTAAC CTACTGGGTT GTATTCGCCT
TCTTGAACGT CGTTGAATTC TGGTCCAAGG CTATCTTGTA CTGGGTTCCA TTCTACTTCT
TGTTCAAGAC CATCTTCTTG CTCTACATTG GTGTTCCATC ATTCGGTGGT GCCACTCTTG
TATACCAAAA CATCATCAAG CCATTTTCCG AAAAATATGT TGGTACAGGT GGTAAAGGCA
GTATTGCTAG CAAGATCGAT GATGCTGCTG AAGGTATTTC CTCTGGCGTT GAGCTCTAA
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| Protein sequence | MSSLPEQAKN FLSQIDAKTA NQQLLHQFEK QTGLPRSYAV LALVAVYFVL IFLNVGGVGQ
LLSNIAGFVI PGYYSLIALN TRTSSDDTQL LTYWVVFAFL NVVEFWSKAI LYWVPFYFLF
KTIFLLYIGV PSFGGATLVY QNIIKPFSEK YVGTGGKGSI ASKIDDAAEG ISSGVEL
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