Gene PICST_35784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35784 
Symbol 
ID4838918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp267687 
End bp268139 
Gene Length453 bp 
Protein Length150 aa 
Translation table12 
GC content43% 
IMG OID640390233 
Productpredicted protein 
Protein accessionXP_001384011 
Protein GI150864976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.665347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA AAGAGGACCA GGAGTTGCAG CAGCTCTGGA AACTATTCCA GGATTCTCCT 
GAGGAAATTA AACAAAGAAG ACAGCAGATT ACCAAAATCA TCCACGATGA CCAGAAGTCT
GAGTTTCCTA CTCTGATGTC TATAGTGACA GCATTTGATG AGCTTCTAGG ATGTTTTTCC
TTGGGTGGCC AGCTTAAGAA CTATTACAGA TATGGTAGTA TGGATACGTG TCTGAGACAG
CGAGAGAAGT TGTGGTTTGC TATTGGTAAT GGAAGCTTTA CTGAAGAGAA GAAACCCAAG
CCAGTAGAAG AATTGTCACC CAAAGAGCTA TCCAGCAGGA CGAAAATCCA GGAGTTTTAC
AAGAAGAGAT TATTAGAAGA CAAGGCTCGC GGGAGCTCTG AAGATATATG GAATCAGCGT
GAAGAACCGT TGGATAACCC GTTTAAGAAG TAG
 
Protein sequence
MSDKEDQELQ QLWKLFQDSP EEIKQRRQQI TKIIHDDQKS EFPTSMSIVT AFDELLGCFS 
LGGQLKNYYR YGSMDTCSRQ REKLWFAIGN GSFTEEKKPK PVEELSPKEL SSRTKIQEFY
KKRLLEDKAR GSSEDIWNQR EEPLDNPFKK