Gene PICST_35413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35413 
Symbol 
ID4838322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp282433 
End bp283590 
Gene Length1158 bp 
Protein Length385 aa 
Translation table12 
GC content41% 
IMG OID640389637 
Productpredicted protein 
Protein accessionXP_001383334 
Protein GI150864497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00327783 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAG CAGTCTCAAA GTCTAGACCA TCTACTTCCA ATGCGAATCA TGCCAATAGA 
TACACGTACA ATAAATTTGG CTCAAGAAAG GAATCGGCTT CAACTCGAGA AACAGCGATA
GCTGGAAGCC TTGAAAGCTC CAGAAGTTCG AGAGAAAATC AAAATCAAAA TCATAATCAG
AACTTGAATC CGAAAAAGAT TCTGGCTTCG AGTGAAATCG ACTATTGCAA TCATTACATC
CATACCAAAC AGAATGCGAT TTCTCAGATC AGAAACATCG CCAATCCCAC TGAGGGTTAT
CCGAAACTAA GCAAGTTACA TCAGTTGAAA CGAGCCCAGG TAGAGAAACA TGCTACTACC
CCCTATGGAG TACGTGTAGC TACAGACAAA ATTATTCCTA CTATTAACAG TTGGATCGAC
AACTATGGAT TGAAATTTGA CGTTATCATG ATCGGGGCAC TTGTAGAAAA CCAGTTCATA
TTACCGCTAT TAAATTCCAT TCCTATCAGT AAACTTTGTG CTAAGCCAGG ATTCTTGTTC
ATTTGGGCTA CTACTCAGAA GATTATCGAA CTTACTAGTC TCTTGAACAA CGACAATTTC
AACAAGAAGT TCAGAAGATC TGAAGAGTTG ATCTTCTTGC CTGTAGACAA GGACTCTCCG
TATTATCCTG ATAACTCTGG AGACTCTGTT TCATTGTTGG AGAAACAACA ATGGCACTGT
TGGATGTGTA TTACCGGTAC AGTTAGAAGG TCTACCGATA ATCATCTCAT CCACTGCAAC
GTCGATACAG ATCTACAAAT CGAGAGTGCT GGTAACAAAA AGAAAAGCTC TGTACCCGAG
GCGATGTACC GAGTAGCAGA AAACTTCTCG AACTCCAACA GAAGACTACA CATCATTCCG
TCTAAAACGG GCTATGACTG TCCTATAAAA ATAAGAAAAG GGTGGGTAAT TATGGGTCCC
GACGTCATTC TCAACAACTT CGATCCCATG AACTACAGTA GAGAATTGAA TGCGGCTTCT
GTCGTACAAT ATAATACGTA TGCTAATGGA TCCAATACTG GAGCTAATGC TCAATACTTG
GTTCCACAGA CTAACGAAAT TGAAGACTTG AGACCAAAGA GTCCAGTTTC CGGAGGTAAA
AAGACGAATT CTACATGA
 
Protein sequence
MSRAVSKSRP STSNANHANR YTYNKFGSRK ESASTRETAI AGSLESSRSS RENQNQNHNQ 
NLNPKKISAS SEIDYCNHYI HTKQNAISQI RNIANPTEGY PKLSKLHQLK RAQVEKHATT
PYGVRVATDK IIPTINSWID NYGLKFDVIM IGALVENQFI LPLLNSIPIS KLCAKPGFLF
IWATTQKIIE LTSLLNNDNF NKKFRRSEEL IFLPVDKDSP YYPDNSGDSV SLLEKQQWHC
WMCITGTVRR STDNHLIHCN VDTDLQIESA GNKKKSSVPE AMYRVAENFS NSNRRLHIIP
SKTGYDCPIK IRKGWVIMGP DVILNNFDPM NYSRELNAAS VVQYNTYANG SNTGANAQYL
VPQTNEIEDL RPKSPVSGGK KTNST