Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_35413 |
Symbol | |
ID | 4838322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 282433 |
End bp | 283590 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389637 |
Product | predicted protein |
Protein accession | XP_001383334 |
Protein GI | 150864497 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00327783 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGAG CAGTCTCAAA GTCTAGACCA TCTACTTCCA ATGCGAATCA TGCCAATAGA TACACGTACA ATAAATTTGG CTCAAGAAAG GAATCGGCTT CAACTCGAGA AACAGCGATA GCTGGAAGCC TTGAAAGCTC CAGAAGTTCG AGAGAAAATC AAAATCAAAA TCATAATCAG AACTTGAATC CGAAAAAGAT TCTGGCTTCG AGTGAAATCG ACTATTGCAA TCATTACATC CATACCAAAC AGAATGCGAT TTCTCAGATC AGAAACATCG CCAATCCCAC TGAGGGTTAT CCGAAACTAA GCAAGTTACA TCAGTTGAAA CGAGCCCAGG TAGAGAAACA TGCTACTACC CCCTATGGAG TACGTGTAGC TACAGACAAA ATTATTCCTA CTATTAACAG TTGGATCGAC AACTATGGAT TGAAATTTGA CGTTATCATG ATCGGGGCAC TTGTAGAAAA CCAGTTCATA TTACCGCTAT TAAATTCCAT TCCTATCAGT AAACTTTGTG CTAAGCCAGG ATTCTTGTTC ATTTGGGCTA CTACTCAGAA GATTATCGAA CTTACTAGTC TCTTGAACAA CGACAATTTC AACAAGAAGT TCAGAAGATC TGAAGAGTTG ATCTTCTTGC CTGTAGACAA GGACTCTCCG TATTATCCTG ATAACTCTGG AGACTCTGTT TCATTGTTGG AGAAACAACA ATGGCACTGT TGGATGTGTA TTACCGGTAC AGTTAGAAGG TCTACCGATA ATCATCTCAT CCACTGCAAC GTCGATACAG ATCTACAAAT CGAGAGTGCT GGTAACAAAA AGAAAAGCTC TGTACCCGAG GCGATGTACC GAGTAGCAGA AAACTTCTCG AACTCCAACA GAAGACTACA CATCATTCCG TCTAAAACGG GCTATGACTG TCCTATAAAA ATAAGAAAAG GGTGGGTAAT TATGGGTCCC GACGTCATTC TCAACAACTT CGATCCCATG AACTACAGTA GAGAATTGAA TGCGGCTTCT GTCGTACAAT ATAATACGTA TGCTAATGGA TCCAATACTG GAGCTAATGC TCAATACTTG GTTCCACAGA CTAACGAAAT TGAAGACTTG AGACCAAAGA GTCCAGTTTC CGGAGGTAAA AAGACGAATT CTACATGA
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Protein sequence | MSRAVSKSRP STSNANHANR YTYNKFGSRK ESASTRETAI AGSLESSRSS RENQNQNHNQ NLNPKKISAS SEIDYCNHYI HTKQNAISQI RNIANPTEGY PKLSKLHQLK RAQVEKHATT PYGVRVATDK IIPTINSWID NYGLKFDVIM IGALVENQFI LPLLNSIPIS KLCAKPGFLF IWATTQKIIE LTSLLNNDNF NKKFRRSEEL IFLPVDKDSP YYPDNSGDSV SLLEKQQWHC WMCITGTVRR STDNHLIHCN VDTDLQIESA GNKKKSSVPE AMYRVAENFS NSNRRLHIIP SKTGYDCPIK IRKGWVIMGP DVILNNFDPM NYSRELNAAS VVQYNTYANG SNTGANAQYL VPQTNEIEDL RPKSPVSGGK KTNST
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