Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34966 |
Symbol | |
ID | 4837669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 902222 |
End bp | 903016 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640388984 |
Product | predicted protein |
Protein accession | XP_001382411 |
Protein GI | 150863810 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3642] Mn2+-dependent serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.299902 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATT ATCTTGTAGG GCAAGTTCAG AAACATTTAC CTCATATTCC TGTAGAGGTT GTTTCGCAAG GAGCGGAAGC TCTTGTATTT AAAACTTCGG TTCATCCGTA CTTGCCTAAT AGCATCTCTC CCTACTTGGA CAATCATGAC GAATATATCA TTAAATTCAG ACCTCCCAAG CCTTACAGAC ATCCTAAGAT TGATGCAAGT ATCACCAAGA ACCGTACAGT GGGCGAGGTG AAGTTTATGA GTAAGTTGGC AAGAATTGGC ATTCGGGCTC CTTCTTTAAT TCTGGCTGAT TTCAACAATG GAATAATATG GATGGAATGT TTGGGCCAGA CTTTGCCTAA TGGAGAGGTC TCGAGCTTCA AGAATTGGCT CTGGTATTTG GAACGTAACG AAATTCCAGA TAAATGTGTC AGCGATGAAG TGCGGGTTGT TTGTATTAAA GTAGGTGCAC TTATTGGTAG ATTGCATTTA AACAATATGG TTCATGGGGA TTTGACATCT TCCAATATTC TCTTAGAGAA CTTCGAGCCC GCTCTCATAG ATTTTGGATT GTCTTCGTAT TCTGGACTAG CCGAGGATAA GGCTGTAGAT TTATACGTTA TGGAGCGTGC CATTCTCAGC ACCCATTCAG TTTTCTCTGA CAAGTACAAC GCCTGGTTGC TTGAGGGATA TGAACAAATA CATGAAACAG AGTTTGGCAA ACAGGGTAAA AAGAAGCATT TGGAGACGAT ACGGAAATTA GAAGATGTCA GATTGAGAGG CAGAAAGAGA AGTATGTTGG GATAA
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Protein sequence | MTDYLVGQVQ KHLPHIPVEV VSQGAEALVF KTSVHPYLPN SISPYLDNHD EYIIKFRPPK PYRHPKIDAS ITKNRTVGEV KFMSKLARIG IRAPSLISAD FNNGIIWMEC LGQTLPNGEV SSFKNWLWYL ERNEIPDKCV SDEVRVVCIK VGALIGRLHL NNMVHGDLTS SNILLENFEP ALIDFGLSSY SGLAEDKAVD LYVMERAILS THSVFSDKYN AWLLEGYEQI HETEFGKQGK KKHLETIRKL EDVRLRGRKR SMLG
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