Gene PICST_34966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34966 
Symbol 
ID4837669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp902222 
End bp903016 
Gene Length795 bp 
Protein Length264 aa 
Translation table12 
GC content41% 
IMG OID640388984 
Productpredicted protein 
Protein accessionXP_001382411 
Protein GI150863810 
COG category[T] Signal transduction mechanisms 
COG ID[COG3642] Mn2+-dependent serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.299902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATT ATCTTGTAGG GCAAGTTCAG AAACATTTAC CTCATATTCC TGTAGAGGTT 
GTTTCGCAAG GAGCGGAAGC TCTTGTATTT AAAACTTCGG TTCATCCGTA CTTGCCTAAT
AGCATCTCTC CCTACTTGGA CAATCATGAC GAATATATCA TTAAATTCAG ACCTCCCAAG
CCTTACAGAC ATCCTAAGAT TGATGCAAGT ATCACCAAGA ACCGTACAGT GGGCGAGGTG
AAGTTTATGA GTAAGTTGGC AAGAATTGGC ATTCGGGCTC CTTCTTTAAT TCTGGCTGAT
TTCAACAATG GAATAATATG GATGGAATGT TTGGGCCAGA CTTTGCCTAA TGGAGAGGTC
TCGAGCTTCA AGAATTGGCT CTGGTATTTG GAACGTAACG AAATTCCAGA TAAATGTGTC
AGCGATGAAG TGCGGGTTGT TTGTATTAAA GTAGGTGCAC TTATTGGTAG ATTGCATTTA
AACAATATGG TTCATGGGGA TTTGACATCT TCCAATATTC TCTTAGAGAA CTTCGAGCCC
GCTCTCATAG ATTTTGGATT GTCTTCGTAT TCTGGACTAG CCGAGGATAA GGCTGTAGAT
TTATACGTTA TGGAGCGTGC CATTCTCAGC ACCCATTCAG TTTTCTCTGA CAAGTACAAC
GCCTGGTTGC TTGAGGGATA TGAACAAATA CATGAAACAG AGTTTGGCAA ACAGGGTAAA
AAGAAGCATT TGGAGACGAT ACGGAAATTA GAAGATGTCA GATTGAGAGG CAGAAAGAGA
AGTATGTTGG GATAA
 
Protein sequence
MTDYLVGQVQ KHLPHIPVEV VSQGAEALVF KTSVHPYLPN SISPYLDNHD EYIIKFRPPK 
PYRHPKIDAS ITKNRTVGEV KFMSKLARIG IRAPSLISAD FNNGIIWMEC LGQTLPNGEV
SSFKNWLWYL ERNEIPDKCV SDEVRVVCIK VGALIGRLHL NNMVHGDLTS SNILLENFEP
ALIDFGLSSY SGLAEDKAVD LYVMERAILS THSVFSDKYN AWLLEGYEQI HETEFGKQGK
KKHLETIRKL EDVRLRGRKR SMLG