Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_34851 |
Symbol | |
ID | 4837240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 442504 |
End bp | 443268 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388555 |
Product | predicted protein |
Protein accession | XP_001382318 |
Protein GI | 150863746 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.862936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTGTG AGCAAGAGCA TTTCCACTCT CACAGCCATG GTGGACATGA TGGAGATGAT GATGGCCACA GTCACAGCCA CAGCCATGGT GATGATGGTC ACCAGCACAT TGCTCCTATT CCAACAAACG CTTCGCAATC GTTGCTTTCC AAGATAGACA CCACTAAAGT AACAGCTTTG AACATGGCAA ATCCTCCTGA CGAGGCTGCT AAGTTGTTCA GACGCCCGGA AGAAAGATAC CGCTTGAAAC CAGTTGTCAA GTCCGACTGC GACGCTCAAC TTATCATCAA TATACCCTTT CTCAATGCTT CAGCTAAGAT ATTCTCCTTG ATCTTGAGAA CTAACGGTGA CAAATTCTGT CCGAAAACCA TAAAACTTTT CAAGAACGAT TCGAATATCG ACTTCGACAA CGTCGAGACA AAAAAGCCGA CATTTGTCAT AACTCATCCT CGCATCGGAG TGTTGTACAA CGACGACGGA AATGAAGAAA TCCCGGAATC TGTAGAAAAT GACAACGAGT TTGTAGAGCA TTACTTGCCA CGTCACATCT TCACGGGAGT CCAGCAGTTG TCAGTGTTTA TTGAAAACAT CTACGATGAA GACGAAGAAG AGGAGAGCCA TTTGCATTAT ATAGAGCTCA GAGGTGAGTA CACTGAATTG AACAGAGAGC CAGTGATTAC TTTGTACGAG CTGGCAGCAA ACCCTGCCGA TCACAAAAAC TTGACAAAAG TCGAGTACTC CAATGGATTT GAATTTGGAA GTTAG
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Protein sequence | MSCEQEHFHS HSHGGHDGDD DGHSHSHSHG DDGHQHIAPI PTNASQSLLS KIDTTKVTAL NMANPPDEAA KLFRRPEERY RLKPVVKSDC DAQLIINIPF LNASAKIFSL ILRTNGDKFC PKTIKLFKND SNIDFDNVET KKPTFVITHP RIGVLYNDDG NEEIPESVEN DNEFVEHYLP RHIFTGVQQL SVFIENIYDE DEEEESHLHY IELRGEYTEL NREPVITLYE SAANPADHKN LTKVEYSNGF EFGS
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