Gene PICST_34179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_34179 
SymbolURM12 
ID4851075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp879622 
End bp879927 
Gene Length306 bp 
Protein Length101 aa 
Translation table 
GC content44% 
IMG OID640392783 
Productubiquitin-like protein 
Protein accessionXP_001387399 
Protein GI126274061 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5131] Ubiquitin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTCA AAGTTAAGGT AGAGTTCCTT GGTGGCTTAG ATGTCATCTC CAACAAAGTC 
AGAGAACACT CCTTGAAGGT TCCGCTCGAG GAAGGTGAAG CTACCGTTAA AGACTTGATC
GAGCTCATCA CAAAGTCCAT CATTGCTGAT CCAAAAGATA TACCAGTATT CATAGAAGAT
GATACCGTTC GTCCGGGCAT TCTTGTTCTT ATCAACGACA CCGATTGGGA ATTGGAAGGC
ATGGAAGAGT ACGTTCTTGA GTCTGGCGAT GTGTTTACTT TTACCAGTAC ATTGCATGGA
GGTTAG
 
Protein sequence
MGFKVKVEFL GGLDVISNKV REHSLKVPLE EGEATVKDLI ELITKSIIAD PKDIPVFIED 
DTVRPGILVL INDTDWELEG MEEYVLESGD VFTFTSTLHG G