| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33956 |
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| Symbol | VPS70 |
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| ID | 4840855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 862344 |
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| End bp | 864746 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392170 |
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| Product | membrane protein involved in vacuolar protein sorting |
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| Protein accession | XP_001386580 |
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| Protein GI | 150866850 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACG AAAAGGGTTT CTACACCCCT ATAGAGGTGG CTCCTTCGAG GAAGCAATCG
TGGCTCAAGA GGTTCGCAGC TGGAGCCATT GGAGCCGCTG CATCTCTCTA TCTTCTTAGT
TCTGCTGCTC TGTACTTGAG TACTGAAATC TCAGAGACCG AGGCTAAGAA GATCATTTTG
GATGCGCTTG AAACAAACTT GGCCGGAAAC TGGTCCAAAA TATATACTGC TGAGCCTCAT
TTGGCAGGAA CCAACTTTGG CTTGGTGCAA TTCACCAGAG ATAAATTTGA AGAGTACGGT
TTGGATGCTT CTATCGATAC TTACGAGATT TATGTCAGTT ACCCTAACGA CCATGACTTG
AACTTATTGG ATGCGAAAAC TGAGGAAATC TTGTACAAGG CTCCATTAAA GGAAGACGTA
CTTAAAGAAG ATGAGACCAC CCACGGAAAT GATACTGTTC CTACCTTTTT GGCTTATGCT
GCTAATGGTA ATGTTACTGG TCAATATGTC TACGCAAACT ACGGTACCAA GAAGGACTTT
GAACAGTTAC AAGAATGGGG CGTAGATGTA AAGGGCAAGA TTGTCATTGT CAGATACGGT
GCTATTTTCC GTGGTTTGAA GGTGAAGTTT GCCCAAGAGA ATGGTGCCAT TGGTGTATTG
ATCTACTCTG ATCCTGGCGA TGACCATGGA ATTACAGAGA AAAACGGCTA CAAGCAGTAT
CCCCACGGTC CTGCTAGACA AGAAAGCTCA GTACAAAGAG GTAGTGTACA ATTCTTAGGA
GGAGTAGGTG CTACTCCTGG AGATCCTACT ACTCCTGGTT ATGCTTCTAA GCCTGGTGTA
GAACGTAAAG ACCCACACGC TAGTATTGGT AAGATTCCAG CCTTGCCAAT CTCATACCGT
GAAGTAAAGC CAATCTTGGA AAAGTTGAAC GGTGAAGGTC ACCATGCTAA GGAAGATTCT
TGGATTGGTG AATTAGAAGG CTTCAAGTAC TATACTGGCC CAAGCAAGAA TTATACATTG
AACTTGTACA ACGATCAGAT CTACAACATC TCCACTTTGT ACAACGTCTA TGGTGAAATT
CCTGGCGAAA AGAGGGATGA AGTTATCATA ATTGGTAACC ACAGAGATGC TTGGATCAAG
GGTGGTGCTG GAGACCCCAA CTCCGGTTCT GCTACCATCG TTGAAGTGGC TAGAGCTTTG
GGTGAGTTGA AAAAAGCCGG TTACAAGTTC AAGAGAACTA TAGTCTTCCA AAGTTACGAC
GGTGAAGAAT ACGGTCTTTT AGGCTCTACT GAGCAAGGTG AATACTTTGC AGACAAGTAC
AAGCGTACTG TAGTTGCTTA CTTGAACTTG GATGCATCCA CTACAGGCAG TCACTTGAAG
TTGGGTGCTT CTCCATTGTT GAACAACATC CTCAGAGAAG CTGCTAAGGA ATTGGAATAT
CCAGCCAAAG GTGTTGGCTC CTTGTACGAT CACTTTGTTC AGGAAACAGG TGACAACATC
AAGAACCTTG GATCTGGTTC GGACTACACT GTCTTCTTGG AACATTTAGG TATCCCTTCT
GTTGATTTGG GTTTTGGCCA AGGAAAGGGT GACCCTATCT ACCATTACCA TTCTAACTAC
GATTCCTTCT ACTGGATTTC CGAGTTTGCC GACAAAGGTT TTGTCTACCA TAACTTGGCT
GCTAAGTACT TGTCTCTCAT TGTTTTCGGC TTGGGTGAAC GTGAATTAAT CAACTTCAAG
TTGACTGATT ACTCTAAGGA CCTCATCAAA TACTACAATG AGACTATTAA GGCAGTTCCA
AAGAAGTGGT TCCACCAAGA AATCTCGCAA GAGACCTGGG ATAAATACTT GAACCATGAT
ATTGCTGATA TCGAGTTTAT TTCTAAGGCT ACTTCAAGAA CTTACCTTCC AAGAAGATGG
TTCCCTTTCC CAGAGTTGTT GAACGTGAGA GACTGTAAAA TGAAGGGTCA CTTGATGTAC
GACTCCAAGC ACCACAAGAA TGCTACTTTG GAGGACCTCC TTTTGAAGAC TCTTGAAGAT
ATTAACACTT TACAAAACAG TACTGTCTCA TTCGATTTGA AGACCTTTGA TCTTCAATCG
CAACATGAAA ACAAAGATGA CTTGAACTTC TGGCAGAGAT TTAAATTACA TTTCCAGATC
AAGGGCCACA ATAAGTTACT TCAATATTTC GAAAGAAACT TCTTATACCA CAAGGGCTTG
TACGAGAGAC CATGGTTCAA ACACATTGTG TTTGCCAGTG GTAGATTTAC AGGTTACGAA
GGCCAAACTT TCCCAGGGTT GAAGGAAGCT CTTGAAGATG GCGATTTTGA GAGATTTGTT
GATTGGCTCG GTATTGTGTC CAAGGCTATC AGAAGAATTA ATGCCGAGAT TGCAGTTAAA
TGA
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| Protein sequence | MSDEKGFYTP IEVAPSRKQS WLKRFAAGAI GAAASLYLLS SAASYLSTEI SETEAKKIIL
DALETNLAGN WSKIYTAEPH LAGTNFGLVQ FTRDKFEEYG LDASIDTYEI YVSYPNDHDL
NLLDAKTEEI LYKAPLKEDV LKEDETTHGN DTVPTFLAYA ANGNVTGQYV YANYGTKKDF
EQLQEWGVDV KGKIVIVRYG AIFRGLKVKF AQENGAIGVL IYSDPGDDHG ITEKNGYKQY
PHGPARQESS VQRGSVQFLG GVGATPGDPT TPGYASKPGV ERKDPHASIG KIPALPISYR
EVKPILEKLN GEGHHAKEDS WIGELEGFKY YTGPSKNYTL NLYNDQIYNI STLYNVYGEI
PGEKRDEVII IGNHRDAWIK GGAGDPNSGS ATIVEVARAL GELKKAGYKF KRTIVFQSYD
GEEYGLLGST EQGEYFADKY KRTVVAYLNL DASTTGSHLK LGASPLLNNI LREAAKELEY
PAKGVGSLYD HFVQETGDNI KNLGSGSDYT VFLEHLGIPS VDLGFGQGKG DPIYHYHSNY
DSFYWISEFA DKGFVYHNLA AKYLSLIVFG LGERELINFK LTDYSKDLIK YYNETIKAVP
KKWFHQEISQ ETWDKYLNHD IADIEFISKA TSRTYLPRRW FPFPELLNVR DCKMKGHLMY
DSKHHKNATL EDLLLKTLED INTLQNSTVS FDLKTFDLQS QHENKDDLNF WQRFKLHFQI
KGHNKLLQYF ERNFLYHKGL YERPWFKHIV FASGRFTGYE GQTFPGLKEA LEDGDFERFV
DWLGIVSKAI RRINAEIAVK
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