| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33877 |
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| Symbol | VTC2 |
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| ID | 4840910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 679855 |
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| End bp | 682200 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640392225 |
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| Product | Phosphate metabolism transcription protein |
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| Protein accession | XP_001386536 |
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| Protein GI | 150866813 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG5036] SPX domain-containing protein involved in vacuolar polyphosphate accumulation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0517097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTCG GGACCAAATT GGACCACGAG CTCTACGACC CTTGGAAGCA GTACTACATC
AACTACAACC ACCTCAAGAA GTTGTTGAAA GAGGGAGTCA TTCTCAAGAA CAACTGGACC
GATAAGGATG AACAGAACTT TGTTCTGGCT CTTGACGAGA ACTTGGAAAA GGTGTACACC
TTCCAGCACC AGAAGTTCGA TGAGTTGAAC GACCAATTGA ACGACTTGCA GTTGCAGACA
GAAACCTCGG GCGCCGACTT CAATGTCGAA TCGTTTTCTT CCAAGTTGGA CAGAATTTTG
GACGAGGCCC AGGAATTGGA ACATTTCCAG AGAATTAACT ACACCGGCTT CATCAAAATC
GTCAAGAAGC ATGACCGTTT GCACTCCAAC TACTCTGTTA AGCCTTTGTT GAATGTCAGA
TTAAAGAGCT TGCCTTTCCA CTCCGAAGAT TACAGTCCTT TGTTGTACAA GGTTGGTACT
CTCTTCCAGT TCTTGCGTGA AAACTACGAC GTCGACCAGG CTTTGTCCAA GTTGTCGTCG
TTCAACGACT CTGGTTTGAA TGCCGAATTC CAGTCATTCA AGTTCTGGAT CCACCCTGAA
AACTTAATGG AAGTCAAGAC CACCATCTTG AGACACTTGC CCGTGTTGAT CTACAACAGT
GAAAATGTTT CGCAAATAGA TGACGATGAT GACGATGACG AAGAAGAAGA CGAGGCCATC
AACGACCAGA CCATCAATGC CTTGTACTTT GACAACAACC ATTTTGAGTT GTACAACAAT
AAGTTGACGA AAATCAACAA CTCGTCCACT TTACGTATCA AGTGGATTGG CAAGTTGGCC
GACAAGCCAA AAATCGTTAT GGAAAAGAAG CAATTCGATT CCAACTCCAA CTTTAACGTG
GATGACAAGA TTACTTTGAA GCAAAAGTAC ATCAACCAGT TCGTCATCAA CAAGGAGCTT
CCCAGCAAGT TAAAGAAGAT CAATGACGAA CTGTCGCTCA ACCACATTCT TGGCTTCATC
AACGAATTCA ACTTGCAGCC TATCTTGAGA ACAACCTATA AACGTACCGC TTTCCAAATT
CCTGGCGACG ACAAGATTAG AATCGTCATC GATACCAACT TGAACTTCAT TAGAGAAGAC
TCGTTTGACT CTCAATTGCC AATTAGAGAC CCTTCGAGCT GGCACAGAAC CGATATCGAC
TCCAACACTG CTAATCCACA GCAATTCTTA CGTAAGGGTG AATACATCAA GTTCCCATAC
TCTACCATGG AAATCAAGAT TAAGAAGTCT GCTGCTAAGA ACTTCAAGAA GTTGAACTGG
ATCAATGAAT TGATCAACTC TTCCAATTTG ATTAAGGAAA TTCCAAACTT TTCCAAGTTC
ATCCACGGTG TAGCTTCATT GTTCTTAGAA GACGACAAGT TGGATAACAT CCCTCTTTGG
TTCAATGAAT TGGAGAATGA CATCTCGTCT ACTTCACACT ACGTGCCAAA GTCCAAGAGA
ACATTGCAAC AGCAAGAAAA TGACATCCAG AACTTGACCG ACGCCGACAA CTTGTCCAAG
TTCAAGTCGA TGATTCTCAA GAACCAGAGT TCAAGCTTCC AGCCTAGATC GTCTTCCTTC
TCTGGTTCCA TGTTGTTGAA CATCAACAAG GACGAAGAAG AATCAATTGA CCACAGTGTT
GGACCCTCTT CTTCTCACGT GCAAACGATT GAAGAAGAAG CTCCTCAATC AGGTTTAACA
GATGATCAGT CATCCGAATT TGATGATGAT GACGACGACG ATCTTCCAGG CTCCAGAGCC
AATCCAATTT CGAAGATTTT GAACTTGCCA GTTCAATTCT CAAAATTGCT TGACGTTGAC
TCAGAAGACG AAGAGGTAGA TCTTCCACTT GGTGTCAGCA AGCCTGAGAG CTGGATCAAG
AACGCTGGTC CACTTAAGAT TGAACCCAAG GTCTGGTTGG CTAACGAAAG AACTTTCAAC
AGGTGGTTGC ATGTGACTAC TTTGCTCTCG ACCTTGACAT TTGTCATCTA CTCGTCGACT
ATGAACTCTA ACTTTGCCGG ATTATCCACC ATCTTGGCAT ACTTTTATTT TGCATTAACA
TTGTTCTCTG GAATCTGGGG TTACTACATT TTCATGAGAA GAAGAACAAT CATTATGGAA
AGATCAGACA AGCATTTGGA CAATTCCATC GGACCGCTTA TTGTAGCCTT TGGTCTTATC
TTGGCGTTAG TTGTCAACTT TGTCTTTGGC TGGAAGGGGT TGAAGGTTGA TCTTGACGAT
GAGTTCTACG CCAACAACAC CGTGCACAGG GCTATCCATG AGTACGTGAT CAACTTGGTC
AACTAA
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| Protein sequence | MLFGTKLDHE LYDPWKQYYI NYNHLKKLLK EGVILKNNWT DKDEQNFVSA LDENLEKVYT
FQHQKFDELN DQLNDLQLQT ETSGADFNVE SFSSKLDRIL DEAQELEHFQ RINYTGFIKI
VKKHDRLHSN YSVKPLLNVR LKSLPFHSED YSPLLYKVGT LFQFLRENYD VDQALSKLSS
FNDSGLNAEF QSFKFWIHPE NLMEVKTTIL RHLPVLIYNS ENVSQIDDDD DDDEEEDEAI
NDQTINALYF DNNHFELYNN KLTKINNSST LRIKWIGKLA DKPKIVMEKK QFDSNSNFNV
DDKITLKQKY INQFVINKEL PSKLKKINDE SSLNHILGFI NEFNLQPILR TTYKRTAFQI
PGDDKIRIVI DTNLNFIRED SFDSQLPIRD PSSWHRTDID SNTANPQQFL RKGEYIKFPY
STMEIKIKKS AAKNFKKLNW INELINSSNL IKEIPNFSKF IHGVASLFLE DDKLDNIPLW
FNELENDISS TSHYVPKSKR TLQQQENDIQ NLTDADNLSK FKSMILKNQS SSFQPRSSSF
SGSMLLNINK DEEESIDHSV GPSSSHVQTI EEEAPQSGLT DDQSSEFDDD DDDDLPGSRA
NPISKILNLP VQFSKLLDVD SEDEEVDLPL GVSKPESWIK NAGPLKIEPK VWLANERTFN
RWLHVTTLLS TLTFVIYSST MNSNFAGLST ILAYFYFALT LFSGIWGYYI FMRRRTIIME
RSDKHLDNSI GPLIVAFGLI LALVVNFVFG WKGLKVDLDD EFYANNTVHR AIHEYVINLV
N
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