| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33834 |
|---|
| Symbol | |
|---|
| ID | 4840920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009048 |
|---|
| Strand | - |
|---|
| Start bp | 587987 |
|---|
| End bp | 588511 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640392235 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386706 |
|---|
| Protein GI | 150866940 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.380866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGAG ATATCGTATC CTTGGATGAT CTCACGGTCA ACAACATTGG AGTATTCAAG
AAAATCAATC TGGTCACGTT GCCAACTTCT TACTCTGAAC AATGGTACAA GGATTCTTTG
AACACTGACC AGATTGTCAA GTTAGCATAC TATTCCGAAT TACCTGTTGG AGCTATTAAG
GCTAAAACTA TCAACTCGGC TCATAAGATA TCGACATATG AAAACATGCA GCAACAGCAG
ATCAATGCCA AAATTGTTCC TAATGCTGTG TACGTTGAGT CGTTTGCTGT ATTGGAAGCT
TACAGAGGTT TAGGTATCGG TGAAAGATTG CTTAAATTCT TGGAAGAGGA AACAAAGAAG
AAGTTTATTC ACGAAATAGT GTTTCATGTT CATATAGACA ACACTGCAGC TGTTGAATGG
TACGAAAAGC ATGGGTTCGC CAAAAGTGAA GAAGTCCTCA AGGACTACTA CAAGGATCAA
GGCTTGTCTA ATCCAGATGC CTTCATACTT TCCAAGTCCA TATAG
|
|---|
| Protein sequence | MGRDIVSLDD LTVNNIGVFK KINSVTLPTS YSEQWYKDSL NTDQIVKLAY YSELPVGAIK
AKTINSAHKI STYENMQQQQ INAKIVPNAV YVESFAVLEA YRGLGIGERL LKFLEEETKK
KFIHEIVFHV HIDNTAAVEW YEKHGFAKSE EVLKDYYKDQ GLSNPDAFIL SKSI
|
|---|
| |