| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33726 |
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| Symbol | SGA1 |
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| ID | 4840861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009048 |
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| Strand | + |
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| Start bp | 337269 |
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| End bp | 338951 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640392176 |
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| Product | Glucoamylase GLU1 precursor (Glucan 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) |
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| Protein accession | XP_001386458 |
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| Protein GI | 150866757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.259511 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGC AATTACTATT GTTATTACAG TTTGTTAGCT TCTGCTACAG TTTGTACATC
CCAATTGGAG GACAATCTTT CAATAGAGGT CTCATCGAAA TTGAAAAAAG CATAGGTGAT
GCTACCGACG GCTCATTCCT TCCTGGTTTT ATTCAGCAGT TCTTCAGTTG GTCAGTTTCG
GAGAAGGTAG AAGATAACAT CCGCCTTGTT GATTTTGAGA CATGGATTGA GAAGCAGAAG
GAAATTTCAT TCAGAGGTAT CCTTAATAAT ATCGGGGGTG TCAGTGATAC TCTCGAACAA
TCTGAAGTTT CCAAAGGCGC TGTAATCGCT TCTCCATCGA GAATTCAGCC AAATTACTTT
TACCAGTGGG TGAGAGACGC TGCTTTAACC ATTAAGTCAC TTGTTTATCA CATTGATGAT
AACAATTTTG AAAATGTCGA CGATATCCAA TCAGTTATCG AAGCGTACAT AGAGAACAAC
TATTATTTGC AACGTTTAGA TAACAACTCT GGAAAGTTTG ATGACCCAGA TAAGTCTGGC
CTTGGAGAAC CAAAGTTCCA TGCAAACAAT ACGGCTTTCG TCCAAAACTG GGGTAGACCT
CAGAGAGATG GGCCAGGTTT AAGAGCTATC ACTATTTTGA GTTATGTGAG CTTGTTGGAC
AAGTGGAACA AGAAAGTTTC CAACAAGTTT TTGAAGTCTC CAGAATTTAT CTATAACAAA
ATCGTGAAGC CTGACTTAAC TTACATTGTC AGAAATTGGT TCAAAGAGGG ATTTGATTTA
TGGGAAGAAA TAAATTCGCA TCACTTTTAC ACGTCTGTCA CACAACTAGC TGCAATCAAG
GATGGTTTAT TATTGGCCCA GAAGTTTGAA AAAGATTCCG ATTTTTTGAG ACAATTGCAA
ATCACTTATA CAAACTTGAA GCAATTTATA GAGAATGATT CTGGTTACAA GAACCCTGCT
GTACCGTATA TCGTTGAAAC TCCACTGTTA CTTAGAGCAG GTAAACGTAC TGGCTTGGAT
GCTGGATCAC TCTTGGGTTC TCTTCATTCT CATAACATGG AATTTGGAGA CTATAGTGAC
ATTCCGTTTG ATGTTAATGA TACCCATTTG ATCAACACTT TGAGTGCAAT GGTCGCAGAT
ATGAAGTACA GATATCCTCT CAATCATAAC AAGATTGGGT TTGAAAAGGG CATTGGATGT
GCCTTGGGAA GATATCCTGA AGATATTTAT GATGGATATG GTACTTCTGA AGGTAACCCA
TGGTTTATTT CAACTGCTTC TGCTTCTGAA CTAATTTACA AGTTTATATA CAACTTAGAG
CATAACCACA TGGATATTGT GATTAACAGT CAGAACAAAG ATTTCTTCAA ACAGTTTGTT
GACTTTGATA ATATCCCATC AAATGACTTG ACAACAGTAC CTGCCAATGA TTATACTGAT
TCAATTGTGA TTAGATATGG AACCCAAACA TTCAGAACAC TCTCAATTAA TTTGGTGACA
TATTCTGATT CCTTTTTGGA AGTGATCAAA GATCACGTTG ATAATCAGGG CCGCATGTCG
GAGCAATTCA ATAAGTATCA TGGTTTCATG CAAGGTGCAA GGGATTTGAC TTGGAGTTAT
AGTGCAGTTT GGAATGCCTT CAGATGGAGA CAGAAGACTT TAGATATTTT AGACCAATTC
TAG
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| Protein sequence | MKLQLLLLLQ FVSFCYSLYI PIGGQSFNRG LIEIEKSIGD ATDGSFLPGF IQQFFSWSVS
EKVEDNIRLV DFETWIEKQK EISFRGILNN IGGVSDTLEQ SEVSKGAVIA SPSRIQPNYF
YQWVRDAALT IKSLVYHIDD NNFENVDDIQ SVIEAYIENN YYLQRLDNNS GKFDDPDKSG
LGEPKFHANN TAFVQNWGRP QRDGPGLRAI TILSYVSLLD KWNKKVSNKF LKSPEFIYNK
IVKPDLTYIV RNWFKEGFDL WEEINSHHFY TSVTQLAAIK DGLLLAQKFE KDSDFLRQLQ
ITYTNLKQFI ENDSGYKNPA VPYIVETPSL LRAGKRTGLD AGSLLGSLHS HNMEFGDYSD
IPFDVNDTHL INTLSAMVAD MKYRYPLNHN KIGFEKGIGC ALGRYPEDIY DGYGTSEGNP
WFISTASASE LIYKFIYNLE HNHMDIVINS QNKDFFKQFV DFDNIPSNDL TTVPANDYTD
SIVIRYGTQT FRTLSINLVT YSDSFLEVIK DHVDNQGRMS EQFNKYHGFM QGARDLTWSY
SAVWNAFRWR QKTLDILDQF
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